BEDTools-2.26.0-2.fc25.x86_64.rpm


Advertisement

Description

BEDTools - A flexible suite of utilities for comparing genomic features

Distribution: Fedora 25
Repository: Fedora x86_64
Package name: BEDTools
Package version: 2.26.0
Package release: 2.fc25
Package architecture: x86_64
Package type: rpm
Installed size: 12.89 MB
Download size: 7.69 MB
Official Mirror: dl.fedoraproject.org
The BEDTools utilities allow one to address common genomics tasks such as finding feature overlaps and computing coverage. The utilities are largely based on four widely-used file formats: BED, GFF/GTF, VCF, and SAM/BAM. Using BEDTools, one can develop sophisticated pipelines that answer complicated research questions by "streaming" several BEDTools together.

Alternatives

Provides

  • BEDTools = 2.26.0-2.fc25
  • BEDTools(x86-64) = 2.26.0-2.fc25

    Download

    Install Howto

    Install the BEDTools rpm package:

    # dnf install BEDTools

    Files

    • /usr/bin/annotateBed
    • /usr/bin/bamToBed
    • /usr/bin/bamToFastq
    • /usr/bin/bed12ToBed6
    • /usr/bin/bedToBam
    • /usr/bin/bedToIgv
    • /usr/bin/bedpeToBam
    • /usr/bin/bedtools
    • /usr/bin/closestBed
    • /usr/bin/clusterBed
    • /usr/bin/complementBed
    • /usr/bin/coverageBed
    • /usr/bin/expandCols
    • /usr/bin/fastaFromBed
    • /usr/bin/flankBed
    • /usr/bin/genomeCoverageBed
    • /usr/bin/getOverlap
    • /usr/bin/groupBy
    • /usr/bin/intersectBed
    • /usr/bin/linksBed
    • /usr/bin/mapBed
    • /usr/bin/maskFastaFromBed
    • /usr/bin/mergeBed
    • /usr/bin/multiBamCov
    • /usr/bin/multiIntersectBed
    • /usr/bin/nucBed
    • /usr/bin/pairToBed
    • /usr/bin/pairToPair
    • /usr/bin/randomBed
    • /usr/bin/shiftBed
    • /usr/bin/shuffleBed
    • /usr/bin/slopBed
    • /usr/bin/sortBed
    • /usr/bin/subtractBed
    • /usr/bin/tagBam
    • /usr/bin/unionBedGraphs
    • /usr/bin/windowBed
    • /usr/bin/windowMaker
    • /usr/share/BEDTools/
    • /usr/share/BEDTools/data/aluY.chr1.bed.gz
    • /usr/share/BEDTools/data/gerp.chr1.bed.gz
    • /usr/share/BEDTools/data/knownGene.hg18.chr21.bed
    • /usr/share/BEDTools/data/knownGene.hg18.chr21.short.bed
    • /usr/share/BEDTools/data/refseq.chr1.exons.bed.gz
    • /usr/share/BEDTools/data/simpleRepeats.chr1.bed.gz
    • /usr/share/BEDTools/genomes/human.hg18.genome
    • /usr/share/BEDTools/genomes/human.hg19.genome
    • /usr/share/BEDTools/genomes/human.hg38.genome
    • /usr/share/BEDTools/genomes/mouse.mm10.genome
    • /usr/share/BEDTools/genomes/mouse.mm8.genome
    • /usr/share/BEDTools/genomes/mouse.mm9.genome
    • /usr/share/doc/BEDTools/LICENSE
    • /usr/share/doc/BEDTools/README.md
    • /usr/share/doc/BEDTools/RELEASE_HISTORY
    • /usr/share/doc/BEDTools/docs/Makefile
    • /usr/share/doc/BEDTools/docs/bedtools.ai
    • /usr/share/doc/BEDTools/docs/bedtools.png
    • /usr/share/doc/BEDTools/docs/bedtools.swiss.png
    • /usr/share/doc/BEDTools/docs/build.sh
    • /usr/share/doc/BEDTools/docs/conf.py
    • /usr/share/doc/BEDTools/docs/index.rst
    • /usr/share/doc/BEDTools/docs/make.bat
    • /usr/share/doc/BEDTools/docs/_build/
    • /usr/share/doc/BEDTools/docs/_build/doctrees/environment.pickle
    • /usr/share/doc/BEDTools/docs/_build/doctrees/index.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/advanced-usage.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/bedtools-suite.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/example-usage.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/faq.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/general-usage.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/history.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/installation.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/overview.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/quick-start.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/related-tools.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tips-and-tricks.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/annotate.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/bamtobed.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/bamtofastq.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/bed12tobed6.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/bedpetobam.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/bedtobam.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/closest.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/cluster.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/complement.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/coverage.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/expand.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/fisher.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/flank.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/genomecov.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/getfasta.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/groupby.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/igv.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/intersect.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/jaccard.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/links.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/makewindows.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/map.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/maskfasta.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/merge.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/multicov.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/multiinter.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/nuc.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/overlap.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/pairtobed.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/pairtopair.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/random.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/reldist.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/shift.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/shuffle.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/slop.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/sort.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/subtract.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/tag.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/unionbedg.doctree
    • /usr/share/doc/BEDTools/docs/_build/doctrees/content/tools/window.doctree
    • /usr/share/doc/BEDTools/docs/_build/html/.buildinfo
    • /usr/share/doc/BEDTools/docs/_build/html/genindex.html
    • /usr/share/doc/BEDTools/docs/_build/html/index.html
    • /usr/share/doc/BEDTools/docs/_build/html/objects.inv
    • /usr/share/doc/BEDTools/docs/_build/html/search.html
    • /usr/share/doc/BEDTools/docs/_build/html/searchindex.js
    • /usr/share/doc/BEDTools/docs/_build/html/_images/barski_binding_site.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/bedtoolsMenu.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/closest-glyph.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/cluster-glyph.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/complement-glyph.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/flank-glyph.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/galaxy-bedtools.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/genomecov-glyph.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/getfasta-glyph.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/github-zip-button.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/intersect-glyph.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/jaccard-glyph.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/map-glyph.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/map-speed-comparo.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/maskfasta-glyph.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/memory-comparo.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/merge-glyph.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/random-glyph.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/reldist-glyph.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/reldist-plot.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/res-genes.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/shuffle-glyph.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/slop-glyph.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/speed-comparo.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/subtract-glyph.png
    • /usr/share/doc/BEDTools/docs/_build/html/_images/window-glyph.png
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/index.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/advanced-usage.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/bedtools-suite.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/example-usage.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/faq.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/general-usage.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/history.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/installation.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/overview.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/quick-start.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/related-tools.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tips-and-tricks.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/annotate.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/bamtobed.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/bamtofastq.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/bed12tobed6.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/bedpetobam.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/bedtobam.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/closest.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/cluster.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/complement.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/coverage.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/expand.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/fisher.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/flank.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/genomecov.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/getfasta.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/groupby.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/igv.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/intersect.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/jaccard.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/links.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/makewindows.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/map.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/maskfasta.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/merge.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/multicov.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/multiinter.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/nuc.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/overlap.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/pairtobed.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/pairtopair.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/random.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/reldist.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/shift.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/shuffle.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/slop.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/sort.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/subtract.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/tag.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/unionbedg.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_sources/content/tools/window.txt
    • /usr/share/doc/BEDTools/docs/_build/html/_static/ajax-loader.gif
    • /usr/share/doc/BEDTools/docs/_build/html/_static/basic.css
    • /usr/share/doc/BEDTools/docs/_build/html/_static/bedtools.png
    • /usr/share/doc/BEDTools/docs/_build/html/_static/bedtools.swiss.png
    • /usr/share/doc/BEDTools/docs/_build/html/_static/classic.css
    • /usr/share/doc/BEDTools/docs/_build/html/_static/comment-bright.png
    • /usr/share/doc/BEDTools/docs/_build/html/_static/comment-close.png
    • /usr/share/doc/BEDTools/docs/_build/html/_static/comment.png
    • /usr/share/doc/BEDTools/docs/_build/html/_static/default.css
    • /usr/share/doc/BEDTools/docs/_build/html/_static/doctools.js
    • /usr/share/doc/BEDTools/docs/_build/html/_static/down-pressed.png
    • /usr/share/doc/BEDTools/docs/_build/html/_static/down.png
    • /usr/share/doc/BEDTools/docs/_build/html/_static/file.png
    • /usr/share/doc/BEDTools/docs/_build/html/_static/jquery-1.11.1.js
    • /usr/share/doc/BEDTools/docs/_build/html/_static/jquery.js
    • /usr/share/doc/BEDTools/docs/_build/html/_static/labibi.css
    • /usr/share/doc/BEDTools/docs/_build/html/_static/labibi.js
    • /usr/share/doc/BEDTools/docs/_build/html/_static/minus.png
    • /usr/share/doc/BEDTools/docs/_build/html/_static/plus.png
    • /usr/share/doc/BEDTools/docs/_build/html/_static/pygments.css
    • /usr/share/doc/BEDTools/docs/_build/html/_static/rtd.css
    • /usr/share/doc/BEDTools/docs/_build/html/_static/searchtools.js
    • /usr/share/doc/BEDTools/docs/_build/html/_static/sidebar.js
    • /usr/share/doc/BEDTools/docs/_build/html/_static/underscore-1.3.1.js
    • /usr/share/doc/BEDTools/docs/_build/html/_static/underscore.js
    • /usr/share/doc/BEDTools/docs/_build/html/_static/up-pressed.png
    • /usr/share/doc/BEDTools/docs/_build/html/_static/up.png
    • /usr/share/doc/BEDTools/docs/_build/html/_static/websupport.js
    • /usr/share/doc/BEDTools/docs/_build/html/content/advanced-usage.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/bedtools-suite.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/example-usage.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/faq.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/general-usage.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/history.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/installation.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/overview.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/quick-start.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/related-tools.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tips-and-tricks.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/annotate.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/bamtobed.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/bamtofastq.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/bed12tobed6.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/bedpetobam.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/bedtobam.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/closest.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/cluster.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/complement.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/coverage.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/expand.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/fisher.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/flank.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/genomecov.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/getfasta.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/groupby.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/igv.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/intersect.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/jaccard.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/links.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/makewindows.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/map.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/maskfasta.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/merge.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/multicov.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/multiinter.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/nuc.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/overlap.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/pairtobed.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/pairtopair.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/random.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/reldist.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/shift.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/shuffle.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/slop.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/sort.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/subtract.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/tag.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/unionbedg.html
    • /usr/share/doc/BEDTools/docs/_build/html/content/tools/window.html
    • /usr/share/doc/BEDTools/docs/_static/labibi.css
    • /usr/share/doc/BEDTools/docs/_static/labibi.js
    • /usr/share/doc/BEDTools/docs/content/advanced-usage.rst
    • /usr/share/doc/BEDTools/docs/content/bedtools-suite.rst
    • /usr/share/doc/BEDTools/docs/content/example-usage.rst
    • /usr/share/doc/BEDTools/docs/content/faq.rst
    • /usr/share/doc/BEDTools/docs/content/general-usage.rst
    • /usr/share/doc/BEDTools/docs/content/history.rst
    • /usr/share/doc/BEDTools/docs/content/installation.rst
    • /usr/share/doc/BEDTools/docs/content/overview.rst
    • /usr/share/doc/BEDTools/docs/content/quick-start.rst
    • /usr/share/doc/BEDTools/docs/content/related-tools.rst
    • /usr/share/doc/BEDTools/docs/content/tips-and-tricks.rst
    • /usr/share/doc/BEDTools/docs/content/images/bedtoolsMenu.png
    • /usr/share/doc/BEDTools/docs/content/images/galaxy-bedtools.png
    • /usr/share/doc/BEDTools/docs/content/images/github-zip-button.png
    • /usr/share/doc/BEDTools/docs/content/images/memory-comparo.png
    • /usr/share/doc/BEDTools/docs/content/images/speed-comparo.png
    • /usr/share/doc/BEDTools/docs/content/images/fisher/res-genes.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/barski_binding_site.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/closest-glyph.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/cluster-glyph.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/complement-glyph.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/flank-glyph.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/genomecov-glyph.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/getfasta-glyph.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/intersect-glyph.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/jaccard-glyph.ai
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/jaccard-glyph.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/map-glyph.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/map-glyph.svg
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/map-speed-comparo.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/maskfasta-glyph.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/maskfasta-glyph.svg
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/merge-glyph.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/random-glyph.ai
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/random-glyph.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/reldist-glyph.ai
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/reldist-glyph.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/reldist-plot.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/shuffle-glyph.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/slop-glyph.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/subtract-glyph.png
    • /usr/share/doc/BEDTools/docs/content/images/tool-glyphs/window-glyph.png
    • /usr/share/doc/BEDTools/docs/content/tools/annotate.rst
    • /usr/share/doc/BEDTools/docs/content/tools/bamtobed.rst
    • /usr/share/doc/BEDTools/docs/content/tools/bamtofastq.rst
    • /usr/share/doc/BEDTools/docs/content/tools/bed12tobed6.rst
    • /usr/share/doc/BEDTools/docs/content/tools/bedpetobam.rst
    • /usr/share/doc/BEDTools/docs/content/tools/bedtobam.rst
    • /usr/share/doc/BEDTools/docs/content/tools/closest.rst
    • /usr/share/doc/BEDTools/docs/content/tools/cluster.rst
    • /usr/share/doc/BEDTools/docs/content/tools/complement.rst
    • /usr/share/doc/BEDTools/docs/content/tools/coverage.rst
    • /usr/share/doc/BEDTools/docs/content/tools/expand.rst
    • /usr/share/doc/BEDTools/docs/content/tools/fisher.rst
    • /usr/share/doc/BEDTools/docs/content/tools/flank.rst
    • /usr/share/doc/BEDTools/docs/content/tools/genomecov.rst
    • /usr/share/doc/BEDTools/docs/content/tools/getfasta.rst
    • /usr/share/doc/BEDTools/docs/content/tools/groupby.rst
    • /usr/share/doc/BEDTools/docs/content/tools/igv.rst
    • /usr/share/doc/BEDTools/docs/content/tools/intersect.rst
    • /usr/share/doc/BEDTools/docs/content/tools/jaccard.rst
    • /usr/share/doc/BEDTools/docs/content/tools/links.rst
    • /usr/share/doc/BEDTools/docs/content/tools/makewindows.rst
    • /usr/share/doc/BEDTools/docs/content/tools/map.rst
    • /usr/share/doc/BEDTools/docs/content/tools/maskfasta.rst
    • /usr/share/doc/BEDTools/docs/content/tools/merge.rst
    • /usr/share/doc/BEDTools/docs/content/tools/multicov.rst
    • /usr/share/doc/BEDTools/docs/content/tools/multiinter.rst
    • /usr/share/doc/BEDTools/docs/content/tools/nuc.rst
    • /usr/share/doc/BEDTools/docs/content/tools/overlap.rst
    • /usr/share/doc/BEDTools/docs/content/tools/pairtobed.rst
    • /usr/share/doc/BEDTools/docs/content/tools/pairtopair.rst
    • /usr/share/doc/BEDTools/docs/content/tools/random.rst
    • /usr/share/doc/BEDTools/docs/content/tools/reldist.rst
    • /usr/share/doc/BEDTools/docs/content/tools/shift.rst
    • /usr/share/doc/BEDTools/docs/content/tools/shuffle.rst
    • /usr/share/doc/BEDTools/docs/content/tools/slop.rst
    • /usr/share/doc/BEDTools/docs/content/tools/sort.rst
    • /usr/share/doc/BEDTools/docs/content/tools/subtract.rst
    • /usr/share/doc/BEDTools/docs/content/tools/tag.rst
    • /usr/share/doc/BEDTools/docs/content/tools/unionbedg.rst
    • /usr/share/doc/BEDTools/docs/content/tools/window.rst
    • /usr/share/doc/BEDTools/docs/templates/page.html
    • /usr/share/doc/BEDTools/docs/templates/sidebar-intro.html
    • /usr/share/doc/BEDTools/docs/themes/
    • /usr/share/doc/BEDTools/docs/themes/rtd/theme.conf
    • /usr/share/doc/BEDTools/docs/themes/rtd/static/rtd.css_t

    Changelog

    2016-08-06 - Adam Huffman <bloch@verdurin.com> - 2.26.0-2 - Fix from Kyle Powell to re-enable debuginfo

    2016-07-09 - Adam Huffman <bloch@verdurin.com> - 2.26.0-1 - Update to latest upstream release 2.26.0

    2016-02-03 - Fedora Release Engineering <releng@fedoraproject.org> - 2.25.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild

    2015-09-05 - Adam Huffman <bloch@verdurin.com> - 2.25.0-1 - Update to latest upstream release 2.25.0 - Disable upstreamed patches - Disable double path separator patch for now

    2015-08-23 - Adam Huffman <bloch@verdurin.com> - 2.24.0-6 - Fix binary directory path

    2015-07-18 - Adam Huffman <bloch@verdurin.com> - 2.24.0-5 - Re-enable 32-bit and ARM builds

    2015-07-17 - Adam Huffman <bloch@verdurin.com> - 2.24.0-4 - Add temporary patches to fix 32-bit compilation derived from upstream commits

    2015-07-12 - Adam Huffman <bloch@verdurin.com> - 2.24.0-3 - Disable i686 build until upstream fixes arrive

    2015-07-03 - Peter Robinson <pbrobinson@fedoraproject.org> 2.24.0-2 - Disable hardened build - Exclude ARMv7 for the moment (tracked rhbz 1239119)

    2015-07-01 - Adam Huffman <bloch@verdurin.com> - 2.24.0-1 - Disable debuginfo for now to re-enable build - Disable debuginfo-related patches for now

    Advertisement
    Advertisement