bionetgen-2.2.6-3.fc25.x86_64.rpm


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Description

bionetgen - Software for rule-based modeling of biochemical systems

Distribution: Fedora 25
Repository: Fedora x86_64
Package name: bionetgen
Package version: 2.2.6
Package release: 3.fc25
Package architecture: x86_64
Package type: rpm
Installed size: 503.99 KB
Download size: 196.97 KB
Official Mirror: dl.fedoraproject.org
BioNetGen is software for the specification and simulation of rule-based models of biochemical systems, including signal transduction, metabolic, and genetic regulatory networks. The BioNetGen language has recently been extended to include explicit representation of compartments. A review of methods for rule-based modeling is available in Science Signaling (Sci. STKE, 18 July 2006, Issue 344, p. re6). BioNetGen is presently a mixture of Perl and C++. Network generation is currently implemented in Perl, the network simulator is C++, and a new language parser is being developed with ANTLR.

Alternatives

Provides

  • bionetgen = 2.2.6-3.fc25
  • bionetgen(x86-64) = 2.2.6-3.fc25

    Download

    Install Howto

    Install the bionetgen rpm package:

    # dnf install bionetgen

    Files

    • /usr/bin/run_network
    • /usr/share/doc/bionetgen/CHANGES.txt
    • /usr/share/doc/bionetgen/CREDITS.txt
    • /usr/share/doc/bionetgen/README.md
    • /usr/share/doc/bionetgen/README_FIRST.txt
    • /usr/share/licenses/bionetgen/LICENSE.txt

    Changelog

    2016-10-16 - Zbigniew Jędrzejewski-Szmek <zbyszek@in.waw.pl> - 2.2.6-3 - Rebuild for libsundials (#1384636)

    2016-05-15 - Jitka Plesnikova <jplesnik@redhat.com> - 2.2.6-2 - Perl 5.24 rebuild

    2016-02-11 - Zbigniew Jędrzejewski-Szmek <zbyszek@bupkis> - 2.2.6-1 - Update to latest version - Fix gcc6 compilation issue (#1306648)

    2016-02-03 - Fedora Release Engineering <releng@fedoraproject.org> - 2.2.5-8 - Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild

    2015-06-17 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.2.5-7 - Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild

    2015-06-05 - Jitka Plesnikova <jplesnik@redhat.com> - 2.2.5-6 - Perl 5.22 rebuild

    2015-05-02 - Kalev Lember <kalevlember@gmail.com> - 2.2.5-5 - Rebuilt for GCC 5 C++11 ABI change

    2015-03-31 - Zbigniew Jędrzejewski-Szmek <zbyszek@in.waw.pl> - 2.2.5-4 - Rebuilt for sundials 2.6.0.

    2015-02-26 - Zbigniew Jędrzejewski-Szmek <zbyszek@in.waw.pl> - 2.2.5-3 - Rebuilt for https://fedoraproject.org/wiki/Changes/GCC5 (#1195309)

    2014-11-30 - Zbigniew Jędrzejewski-Szmek <zbyszek@in.waw.pl> - 2.2.5-2 - Drop dependency on compat f77, it is not needed.

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