R-GenomicRanges-1.28.3-4.fc26.i686.rpm


Advertisement

Description

R-GenomicRanges - Representation and manipulation of genomic intervals

Property Value
Distribution Fedora 26
Repository Fedora Updates Testing i386
Package name R-GenomicRanges
Package version 1.28.3
Package release 4.fc26
Package architecture i686
Package type rpm
Installed size 2.72 MB
Download size 1.83 MB
Official Mirror archives.fedoraproject.org
The ability to efficiently store genomic annotations and alignments is
playing a central role when it comes to analyze high-throughput sequencing
data (a.k.a. NGS data). The package defines general purpose containers for
storing genomic intervals as well as more specialized containers for
storing alignments against a reference genome.

Alternatives

Package Version Architecture Repository
R-GenomicRanges-1.28.3-4.fc26.x86_64.rpm 1.28.3 x86_64 Fedora Updates Testing
R-GenomicRanges-1.28.3-1.fc26.x86_64.rpm 1.28.3 x86_64 Fedora
R-GenomicRanges-1.28.3-1.fc26.i686.rpm 1.28.3 i686 Fedora
R-GenomicRanges - - -

Requires

Name Value
R-BiocGenerics >= 0.21.2
R-GenomeInfoDb >= 1.11.5
R-IRanges >= 2.9.11
R-S4Vectors >= 0.9.47
R-XVector -
R-core >= 3.4.0
R-methods -
R-stats -
R-stats4 -
R-utils -
libR.so -
libc.so.6(GLIBC_2.4) -
rtld(GNU_HASH) -

Provides

Name Value
R-GenomicRanges = 1.28.3-4.fc26
R-GenomicRanges(x86-32) = 1.28.3-4.fc26

Download

Type URL
Binary Package R-GenomicRanges-1.28.3-4.fc26.i686.rpm
Source Package R-GenomicRanges-1.28.3-4.fc26.src.rpm

Install Howto

Install the R-GenomicRanges rpm package:

# dnf --enablerepo=updates-testing install R-GenomicRanges

Files

Path
/usr/lib/R/library/GenomicRanges/CITATION
/usr/lib/R/library/GenomicRanges/DESCRIPTION
/usr/lib/R/library/GenomicRanges/INDEX
/usr/lib/R/library/GenomicRanges/NAMESPACE
/usr/lib/R/library/GenomicRanges/NEWS
/usr/lib/R/library/GenomicRanges/Meta/Rd.rds
/usr/lib/R/library/GenomicRanges/Meta/features.rds
/usr/lib/R/library/GenomicRanges/Meta/hsearch.rds
/usr/lib/R/library/GenomicRanges/Meta/links.rds
/usr/lib/R/library/GenomicRanges/Meta/nsInfo.rds
/usr/lib/R/library/GenomicRanges/Meta/package.rds
/usr/lib/R/library/GenomicRanges/Meta/vignette.rds
/usr/lib/R/library/GenomicRanges/R/GenomicRanges
/usr/lib/R/library/GenomicRanges/R/GenomicRanges.rdb
/usr/lib/R/library/GenomicRanges/R/GenomicRanges.rdx
/usr/lib/R/library/GenomicRanges/doc/ExtendingGenomicRanges.R
/usr/lib/R/library/GenomicRanges/doc/ExtendingGenomicRanges.Rnw
/usr/lib/R/library/GenomicRanges/doc/ExtendingGenomicRanges.pdf
/usr/lib/R/library/GenomicRanges/doc/GRanges_and_GRangesList_slides.R
/usr/lib/R/library/GenomicRanges/doc/GRanges_and_GRangesList_slides.Rnw
/usr/lib/R/library/GenomicRanges/doc/GRanges_and_GRangesList_slides.pdf
/usr/lib/R/library/GenomicRanges/doc/GenomicRangesHOWTOs.R
/usr/lib/R/library/GenomicRanges/doc/GenomicRangesHOWTOs.Rnw
/usr/lib/R/library/GenomicRanges/doc/GenomicRangesHOWTOs.pdf
/usr/lib/R/library/GenomicRanges/doc/GenomicRangesIntroduction.R
/usr/lib/R/library/GenomicRanges/doc/GenomicRangesIntroduction.Rnw
/usr/lib/R/library/GenomicRanges/doc/GenomicRangesIntroduction.pdf
/usr/lib/R/library/GenomicRanges/doc/Ten_things_slides.R
/usr/lib/R/library/GenomicRanges/doc/Ten_things_slides.Rnw
/usr/lib/R/library/GenomicRanges/doc/Ten_things_slides.pdf
/usr/lib/R/library/GenomicRanges/doc/index.html
/usr/lib/R/library/GenomicRanges/extdata/feature_frags.txt
/usr/lib/R/library/GenomicRanges/help/AnIndex
/usr/lib/R/library/GenomicRanges/help/GenomicRanges.rdb
/usr/lib/R/library/GenomicRanges/help/GenomicRanges.rdx
/usr/lib/R/library/GenomicRanges/help/aliases.rds
/usr/lib/R/library/GenomicRanges/help/paths.rds
/usr/lib/R/library/GenomicRanges/html/00Index.html
/usr/lib/R/library/GenomicRanges/html/DelegatingGenomicRanges-class.html
/usr/lib/R/library/GenomicRanges/html/GNCList-class.html
/usr/lib/R/library/GenomicRanges/html/GPos-class.html
/usr/lib/R/library/GenomicRanges/html/GRanges-class.html
/usr/lib/R/library/GenomicRanges/html/GRangesList-class.html
/usr/lib/R/library/GenomicRanges/html/GenomicRanges-comparison.html
/usr/lib/R/library/GenomicRanges/html/GenomicRangesList-class.html
/usr/lib/R/library/GenomicRanges/html/R.css
/usr/lib/R/library/GenomicRanges/html/absoluteRanges.html
/usr/lib/R/library/GenomicRanges/html/constraint.html
/usr/lib/R/library/GenomicRanges/html/coverage-methods.html
/usr/lib/R/library/GenomicRanges/html/findOverlaps-methods.html
/usr/lib/R/library/GenomicRanges/html/genomicvars.html
/usr/lib/R/library/GenomicRanges/html/inter-range-methods.html
/usr/lib/R/library/GenomicRanges/html/intra-range-methods.html
/usr/lib/R/library/GenomicRanges/html/makeGRangesFromDataFrame.html
/usr/lib/R/library/GenomicRanges/html/makeGRangesListFromDataFrame.html
/usr/lib/R/library/GenomicRanges/html/nearest-methods.html
/usr/lib/R/library/GenomicRanges/html/phicoef.html
/usr/lib/R/library/GenomicRanges/html/range-squeezers.html
/usr/lib/R/library/GenomicRanges/html/setops-methods.html
/usr/lib/R/library/GenomicRanges/html/strand-utils.html
/usr/lib/R/library/GenomicRanges/html/tile-methods.html
/usr/lib/R/library/GenomicRanges/html/tileGenome.html
/usr/lib/R/library/GenomicRanges/libs/GenomicRanges.so
/usr/lib/R/library/GenomicRanges/scripts/timing_overlaps.R
/usr/lib/R/library/GenomicRanges/unitTests/test_GNCList-class.R
/usr/lib/R/library/GenomicRanges/unitTests/test_GRanges-class.R
/usr/lib/R/library/GenomicRanges/unitTests/test_GRangesList-class.R
/usr/lib/R/library/GenomicRanges/unitTests/test_GenomicRanges-comparison.R
/usr/lib/R/library/GenomicRanges/unitTests/test_coverage-methods.R
/usr/lib/R/library/GenomicRanges/unitTests/test_findOverlaps-methods.R
/usr/lib/R/library/GenomicRanges/unitTests/test_inter-range-methods.R
/usr/lib/R/library/GenomicRanges/unitTests/test_intra-range-methods.R
/usr/lib/R/library/GenomicRanges/unitTests/test_makeGRangesFromDataFrame.R
/usr/lib/R/library/GenomicRanges/unitTests/test_makeGRangesListFromDataFrame.R
/usr/lib/R/library/GenomicRanges/unitTests/test_nearest-methods.R
/usr/lib/R/library/GenomicRanges/unitTests/test_precede_follow.R
/usr/lib/R/library/GenomicRanges/unitTests/test_setops-methods.R

Changelog

2018-05-17 - Tom Callaway <spot@fedoraproject.org> - 1.28.3-4
- rebuild for R 3.5.0
2017-08-02 - Fedora Release Engineering <releng@fedoraproject.org> - 1.28.3-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
2017-07-26 - Fedora Release Engineering <releng@fedoraproject.org> - 1.28.3-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
2017-05-30 - Tom Callaway <spot@fedoraproject.org> - 1.28.3-1
- update to 1.28.3
2017-02-10 - Fedora Release Engineering <releng@fedoraproject.org> - 1.22.1-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
2016-02-03 - Fedora Release Engineering <releng@fedoraproject.org> - 1.22.1-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild
2015-12-07 - Tom Callaway <spot@fedoraproject.org> - 1.22.1-1
- update to 1.22.1
2015-06-16 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.20.3-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild
2015-05-29 - Tom Callaway <spot@fedoraproject.org> - 1.20.3-1
- update to 1.20.3
2014-08-15 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.16.3-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild

See Also

Package Description
R-IRanges-2.10.1-4.fc26.i686.rpm Low-level containers for storing sets of integer ranges
R-IRanges-devel-2.10.1-4.fc26.i686.rpm Development files for R-IRanges
R-RCurl-1.95.4.8-4.fc26.i686.rpm General network (HTTP/FTP) client interface for R
R-RInside-0.2.14-7.fc26.i686.rpm C++ Classes to Embed R in C++ Applications
R-RInside-devel-0.2.14-7.fc26.i686.rpm RInside Development Files
R-RInside-examples-0.2.14-7.fc26.i686.rpm RInside Examples
R-ROC-1.46.0-6.fc26.i686.rpm Utilities for ROC
R-RODBC-1.3.15-5.fc26.i686.rpm An ODBC database interface for R
R-RSQLite-1.1.2-5.fc26.i686.rpm SQLite database interface for R
R-Rcompression-0.93.2-20.fc26.i686.rpm R Package for in-memory compression
R-Rcpp-0.12.17-1.fc26.i686.rpm Seamless R and C++ Integration
R-Rcpp-devel-0.12.17-1.fc26.i686.rpm Rcpp Development Files
R-Rcpp-examples-0.12.17-1.fc26.i686.rpm Rcpp Examples
R-RcppCCTZ-0.2.3-3.fc26.i686.rpm 'Rcpp' Bindings for the 'CCTZ' Library
R-Rmpfr-0.7.0-2.fc26.i686.rpm R MPFR - Multiple Precision Floating-Point Reliable
Advertisement
Advertisement