python2-MDAnalysis-0.16.2-1.fc26.x86_64.rpm


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Description

python2-MDAnalysis - Analyze and manipulate molecular dynamics trajectories

Property Value
Distribution Fedora 26
Repository Fedora Updates x86_64
Package name python2-MDAnalysis
Package version 0.16.2
Package release 1.fc26
Package architecture x86_64
Package type rpm
Installed size 5.44 MB
Download size 1.32 MB
Official Mirror archives.fedoraproject.org
MDAnalysis is a python framework to analyze molecular dynamics trajectories
generated by CHARMM, NAMD, LAMMPS, or Gromacs. It is mainly useful for geometric
analyses, as there is no implemented potential model.
It is inspired by the Schulten Group's MDtools for python, and the source for
the DCD reading code is derived from VMD. MDAnalysis isGPL licensed, except for
the dcd reading code (UIUC Open Source Licence) which comes from VMD (and is
GPL-compatible). Gromacs trajectories are utilizing the Gromacs libxdrfile
library (GPL). MDAnalysis exposes trajectory data transparently as NumPy arrays
and as such it is easily extensible.

Alternatives

Package Version Architecture Repository
python2-MDAnalysis-0.16.2-1.fc26.i686.rpm 0.16.2 i686 Fedora Updates
python2-MDAnalysis-0.14.0-4.fc26.x86_64.rpm 0.14.0 x86_64 Fedora
python2-MDAnalysis-0.14.0-4.fc26.i686.rpm 0.14.0 i686 Fedora
python2-MDAnalysis - - -

Requires

Name Value
libc.so.6(GLIBC_2.14)(64bit) -
libgomp.so.1()(64bit) -
libgomp.so.1(GOMP_4.0)(64bit) -
libgomp.so.1(OMP_1.0)(64bit) -
libm.so.6()(64bit) -
libm.so.6(GLIBC_2.2.5)(64bit) -
libpthread.so.0()(64bit) -
libpthread.so.0(GLIBC_2.2.5)(64bit) -
libpython2.7.so.1.0()(64bit) -
python(abi) = 2.7
python2-GridDataFormats -
python2-biopython -
python2-joblib -
python2-matplotlib -
python2-mmtf -
python2-networkx -
python2-numpy -
python2-scipy -
rtld(GNU_HASH) -

Provides

Name Value
bundled(xdrfile) = 0.7.7
python-MDAnalysis = 0.16.2-1.fc26
python-MDAnalysis(x86-64) = 0.16.2-1.fc26
python2-MDAnalysis = 0.16.2-1.fc26
python2-MDAnalysis(x86-64) = 0.16.2-1.fc26
python2.7dist(mdanalysis) = 0.16.2
python2dist(mdanalysis) = 0.16.2

Obsoletes

Name Value
python-MDAnalysis < 0.16.2-1.fc26

Download

Type URL
Binary Package python2-MDAnalysis-0.16.2-1.fc26.x86_64.rpm
Source Package python-MDAnalysis-0.16.2-1.fc26.src.rpm

Install Howto

Install the python2-MDAnalysis rpm package:

# dnf install python2-MDAnalysis

Files

Path
/usr/lib64/python2.7/site-packages/MDAnalysis/KDTree.py
/usr/lib64/python2.7/site-packages/MDAnalysis/KDTree.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/KDTree.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/__init__.py
/usr/lib64/python2.7/site-packages/MDAnalysis/__init__.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/__init__.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/authors.py
/usr/lib64/python2.7/site-packages/MDAnalysis/authors.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/authors.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/exceptions.py
/usr/lib64/python2.7/site-packages/MDAnalysis/exceptions.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/exceptions.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/units.py
/usr/lib64/python2.7/site-packages/MDAnalysis/units.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/units.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/version.py
/usr/lib64/python2.7/site-packages/MDAnalysis/version.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/version.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis-0.16.2-py2.7.egg-info/PKG-INFO
/usr/lib64/python2.7/site-packages/MDAnalysis-0.16.2-py2.7.egg-info/SOURCES.txt
/usr/lib64/python2.7/site-packages/MDAnalysis-0.16.2-py2.7.egg-info/dependency_links.txt
/usr/lib64/python2.7/site-packages/MDAnalysis-0.16.2-py2.7.egg-info/not-zip-safe
/usr/lib64/python2.7/site-packages/MDAnalysis-0.16.2-py2.7.egg-info/requires.txt
/usr/lib64/python2.7/site-packages/MDAnalysis-0.16.2-py2.7.egg-info/top_level.txt
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/__init__.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/__init__.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/__init__.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/align.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/align.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/align.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/base.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/base.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/base.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/contacts.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/contacts.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/contacts.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/density.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/density.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/density.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/diffusionmap.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/diffusionmap.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/diffusionmap.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/distances.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/distances.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/distances.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/gnm.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/gnm.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/gnm.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/helanal.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/helanal.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/helanal.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/hole.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/hole.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/hole.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/leaflet.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/leaflet.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/leaflet.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/lineardensity.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/lineardensity.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/lineardensity.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/nuclinfo.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/nuclinfo.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/nuclinfo.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/pca.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/pca.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/pca.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/polymer.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/polymer.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/polymer.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/psa.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/psa.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/psa.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/rdf.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/rdf.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/rdf.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/rms.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/rms.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/rms.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/waterdynamics.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/waterdynamics.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/waterdynamics.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/x3dna.py
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/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/__init__.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/__init__.pyc
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/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/bootstrap.py
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/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/confdistmatrix.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/confdistmatrix.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/confdistmatrix.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/covariance.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/covariance.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/covariance.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/cutils.so
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/similarity.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/similarity.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/similarity.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/utils.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/utils.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/utils.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/clustering/ClusterCollection.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/clustering/ClusterCollection.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/clustering/ClusterCollection.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/clustering/ClusteringMethod.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/clustering/ClusteringMethod.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/clustering/ClusteringMethod.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/clustering/__init__.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/clustering/__init__.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/clustering/__init__.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/clustering/affinityprop.so
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/clustering/cluster.py
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/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/clustering/cluster.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/dimensionality_reduction/DimensionalityReductionMethod.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/dimensionality_reduction/DimensionalityReductionMethod.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/dimensionality_reduction/DimensionalityReductionMethod.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/dimensionality_reduction/__init__.py
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/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/dimensionality_reduction/reduce_dimensionality.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/encore/dimensionality_reduction/stochasticproxembed.so
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/hbonds/__init__.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/hbonds/__init__.pyc
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/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/hbonds/hbond_analysis.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/hbonds/hbond_analysis.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/hbonds/hbond_autocorrel.py
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/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/legacy/__init__.py
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/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/legacy/__init__.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/legacy/x3dna.py
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/legacy/x3dna.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/analysis/legacy/x3dna.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/auxiliary/XVG.py
/usr/lib64/python2.7/site-packages/MDAnalysis/auxiliary/XVG.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/auxiliary/XVG.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/auxiliary/__init__.py
/usr/lib64/python2.7/site-packages/MDAnalysis/auxiliary/__init__.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/auxiliary/__init__.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/auxiliary/base.py
/usr/lib64/python2.7/site-packages/MDAnalysis/auxiliary/base.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/auxiliary/base.pyo
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/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/CRD.py
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/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/CRD.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/DCD.py
/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/DCD.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/DCD.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/DLPoly.py
/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/DLPoly.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/DLPoly.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/DMS.py
/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/DMS.pyc
/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/DMS.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/GMS.py
/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/GMS.pyc
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/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/GRO.py
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/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/INPCRD.py
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/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/LAMMPS.py
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/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/LAMMPS.pyo
/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/MMTF.py
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/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/MOL2.py
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/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/PDBQT.py
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/usr/lib64/python2.7/site-packages/MDAnalysis/coordinates/PQR.py
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/usr/lib64/python2.7/site-packages/MDAnalysis/core/Timeseries.py
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/usr/share/doc/python2-MDAnalysis/AUTHORS
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/usr/share/doc/python2-MDAnalysis/SUMMARY.txt
/usr/share/licenses/python2-MDAnalysis/LICENSE

Changelog

2017-06-30 - Dominik Mierzejewski <rpm@greysector.net> - 0.16.2-1
- update to 0.16.2
- update doc tarball URL and handling
- drop obsolete patch
2017-06-22 - Dominik Mierzejewski <rpm@greysector.net> - 0.16.1-3
- fix endianness issues on BE arches (ppc64, s390x)
- increase test process timeout (was timing out on aarch64)
2017-06-17 - Dominik Mierzejewski <rpm@greysector.net> - 0.16.1-2
- backport more fixes from git
2017-06-08 - Dominik Mierzejewski <rpm@greysector.net> - 0.16.1-1
- update to 0.16.1
- fix test failures on 32bit
2017-05-18 - Dominik Mierzejewski <rpm@greysector.net> - 0.16.0-1
- update to 0.16.0
- drop obsolete patches
- add new dependencies (joblib, mmtf, mock, psutil)
- fix netcdf4-python dependencies (need python2-netcdf4, actually)
- switch to nosetests while strange test failures are investigated
(https://github.com/MDAnalysis/mdanalysis/issues/1360)
- add a link to upstream-recommended way of running tests
- modernize python module dependencies
2017-02-11 - Fedora Release Engineering <releng@fedoraproject.org> - 0.14.0-5
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
2016-09-26 - Dominik Mierzejewski <rpm@greysector.net> - 0.14.0-4
- rebuilt for matplotlib-2.0.0
2016-07-19 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.14.0-3
- https://fedoraproject.org/wiki/Changes/Automatic_Provides_for_Python_RPM_Packages
2016-03-15 - Dominik Mierzejewski <rpm@greysector.net> 0.14.0-2
- fix non-standard-dir-perm in doc subpackage
- move python2 build to python2-MDAnalysis subpackage
- exclude private libmdaxdr.so from Provides:
2016-03-11 - Dominik Mierzejewski <rpm@greysector.net> 0.14.0-1
- update to 0.14.0
- don't build docs for now, upstream published them in a zip file
- drop obsolete patch
- fix tests with numpy 1.11
- fix license field for docs subpackage
- install LICENSE with the doc subpackage as well
- move building of docs to the build section
- use some python-related convenience macros

See Also

Package Description
python2-Mastodon-1.2.1-1.fc26.noarch.rpm Python wrapper for the Mastodon API
python2-PyDrive-1.3.1-3.fc26.noarch.rpm A wrapper library of google-api-python-client for Google Drive API tasks
python2-QtPy-1.3.1-1.fc26.noarch.rpm Provides an abstraction layer on top of various Qt bindings
python2-XStatic-jquery-ui-1.12.0.1-2.fc26.noarch.rpm jquery-ui (XStatic packaging standard)
python2-acme-0.23.0-1.fc26.noarch.rpm Python library for the ACME protocol
python2-adal-0.5.0-1.fc26.noarch.rpm ADAL for Python
python2-adduserpath-0.4.0-1.fc26.noarch.rpm Cross-platform tool for adding locations to the user PATH
python2-affine-2.2.0-1.fc26.noarch.rpm Matrices describing affine transformation of the plane
python2-agate-1.6.0-2.gited9e179.fc26.noarch.rpm Data analysis library that is optimized for humans instead of machines
python2-agate-dbf-0.2.0-2.fc26.noarch.rpm Adds read support for DBF files to agate
python2-agate-excel-0.2.1-2.fc26.noarch.rpm Adds read support for Excel files to agate
python2-agate-sql-0.5.2-2.fc26.noarch.rpm Adds SQL read/write support to agate
python2-aiodns-1.1.1-1.fc26.noarch.rpm Simple DNS resolver for asyncio
python2-alembic-0.9.7-3.fc26.noarch.rpm Database migration tool for SQLAlchemy
python2-ansible-tower-cli-3.2.0-1.fc26.noarch.rpm A CLI tool for Ansible Tower
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