bionetgen-2.2.6-8.fc26.x86_64.rpm


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Description

bionetgen - Software for rule-based modeling of biochemical systems

Property Value
Distribution Fedora 26
Repository Fedora x86_64
Package name bionetgen
Package version 2.2.6
Package release 8.fc26
Package architecture x86_64
Package type rpm
Installed size 501.73 KB
Download size 197.58 KB
Official Mirror archives.fedoraproject.org
BioNetGen is software for the specification and simulation of
rule-based models of biochemical systems, including signal
transduction, metabolic, and genetic regulatory networks. The
BioNetGen language has recently been extended to include explicit
representation of compartments. A review of methods for rule-based
modeling is available in Science Signaling (Sci. STKE, 18 July 2006,
Issue 344, p. re6).
BioNetGen is presently a mixture of Perl and C++. Network generation
is currently implemented in Perl, the network simulator is C++, and a
new language parser is being developed with ANTLR.

Alternatives

Package Version Architecture Repository
bionetgen-2.2.6-8.fc26.i686.rpm 2.2.6 i686 Fedora
bionetgen - - -

Requires

Name Value
bionetgen-perl = 2.2.6-8.fc26
libc.so.6(GLIBC_2.14)(64bit) -
libgcc_s.so.1()(64bit) -
libgcc_s.so.1(GCC_3.0)(64bit) -
libm.so.6()(64bit) -
libm.so.6(GLIBC_2.2.5)(64bit) -
libmuparser.so.2()(64bit) -
libstdc++.so.6()(64bit) -
libstdc++.so.6(CXXABI_1.3)(64bit) -
libstdc++.so.6(CXXABI_1.3.8)(64bit) -
libstdc++.so.6(CXXABI_1.3.9)(64bit) -
libstdc++.so.6(GLIBCXX_3.4)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.11)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.20)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.21)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.9)(64bit) -
libsundials_cvode.so.2()(64bit) -
libsundials_nvecserial.so.2()(64bit) -
perl(:MODULE_COMPAT_5.24.1) -
rtld(GNU_HASH) -

Provides

Name Value
bionetgen = 2.2.6-8.fc26
bionetgen(x86-64) = 2.2.6-8.fc26

Download

Type URL
Binary Package bionetgen-2.2.6-8.fc26.x86_64.rpm
Source Package bionetgen-2.2.6-8.fc26.src.rpm

Install Howto

Install the bionetgen rpm package:

# dnf install bionetgen

Files

Path
/usr/bin/run_network
/usr/share/doc/bionetgen/CHANGES.txt
/usr/share/doc/bionetgen/CREDITS.txt
/usr/share/doc/bionetgen/README.md
/usr/share/doc/bionetgen/README_FIRST.txt
/usr/share/licenses/bionetgen/LICENSE.txt

Changelog

2017-05-15 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.2.6-8
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_27_Mass_Rebuild
2017-03-08 - Antonio Trande <sagitterATfedoraproject.org> - 2.2.6-7
- Rebuild for sundials-2.7.0-10
2017-02-10 - Fedora Release Engineering <releng@fedoraproject.org> - 2.2.6-6
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
2016-11-04 - Zbigniew Jędrzejewski-Szmek <zbyszek@in.waw.pl> - 2.2.6-5
- Rebuild for sundials-2.7.0-7
2016-10-25 - Zbigniew Jędrzejewski-Szmek <zbyszek@in.waw.pl> - 2.2.6-4
- Rebuild for sundials-2.7.0-6
2016-10-16 - Zbigniew Jędrzejewski-Szmek <zbyszek@in.waw.pl> - 2.2.6-3
- Rebuild for libsundials (#1384636)
2016-05-15 - Jitka Plesnikova <jplesnik@redhat.com> - 2.2.6-2
- Perl 5.24 rebuild
2016-02-11 - Zbigniew Jędrzejewski-Szmek <zbyszek@bupkis> - 2.2.6-1
- Update to latest version
- Fix gcc6 compilation issue (#1306648)
2016-02-03 - Fedora Release Engineering <releng@fedoraproject.org> - 2.2.5-8
- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild
2015-06-17 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.2.5-7
- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild

See Also

Package Description
bionetgen-perl-2.2.6-8.fc26.noarch.rpm Perl scripts used by bionetgen
bios_extract-0-0.17.20150611gita257643.fc26.x86_64.rpm Tools to extract the different submodules of common legacy bioses
biosdevname-0.6.2-3.fc26.x86_64.rpm Udev helper for naming devices per BIOS names
bip-0.8.9-10.fc25.x86_64.rpm IRC Bouncer
bird-1.6.3-3.fc26.x86_64.rpm BIRD Internet Routing Daemon
bird-doc-1.6.3-3.fc26.x86_64.rpm BIRD Internet Routing Daemon
bird6-1.6.3-3.fc26.x86_64.rpm BIRD Internet Routing Daemon
bison-3.0.4-6.fc26.x86_64.rpm A GNU general-purpose parser generator
bison-devel-3.0.4-6.fc26.i686.rpm -ly library for development using Bison-generated parsers
bison-devel-3.0.4-6.fc26.x86_64.rpm -ly library for development using Bison-generated parsers
bison-runtime-3.0.4-6.fc26.x86_64.rpm Runtime support files used by Bison-generated parsers
bitcoinj-0.14.3-1.fc25.noarch.rpm A Java library implementation of the Bitcoin protocol
bitcoinj-javadoc-0.14.3-1.fc25.noarch.rpm Javadoc for bitcoinj
bitfrost-1.0.19-8.fc26.x86_64.rpm OLPC bitfrost security modules
bitfrost-sugar-1.0.19-8.fc26.x86_64.rpm OLPC bitfrost security modules
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