seqan2-apps-2.4.0-1.fc27.x86_64.rpm


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Description

seqan2-apps - SeqAn (2.x.x) applications

Property Value
Distribution Fedora 27
Repository Fedora Updates x86_64
Package filename seqan2-apps-2.4.0-1.fc27.x86_64.rpm
Package name seqan2-apps
Package version 2.4.0
Package release 1.fc27
Package architecture x86_64
Package type rpm
Homepage -
License -
Maintainer -
Download size 10.65 MB
Installed size 60.45 MB
All SeqAn applications.

Alternatives

Package Version Architecture Repository
seqan2-apps-2.4.0-1.fc27.i686.rpm 2.4.0 i686 Fedora Updates
seqan2-apps - - -

Requires

Name Value
/bin/bash -
gawk(x86-64) -
ld-linux-x86-64.so.2()(64bit) -
ld-linux-x86-64.so.2(GLIBC_2.3)(64bit) -
libbz2.so.1()(64bit) -
libc.so.6(GLIBC_2.14)(64bit) -
libgcc_s.so.1()(64bit) -
libgcc_s.so.1(GCC_3.0)(64bit) -
libgcc_s.so.1(GCC_3.4)(64bit) -
libgomp.so.1()(64bit) -
libgomp.so.1(GOMP_1.0)(64bit) -
libgomp.so.1(GOMP_4.0)(64bit) -
libgomp.so.1(OMP_1.0)(64bit) -
libgomp.so.1(OMP_2.0)(64bit) -
libgomp.so.1(OMP_3.0)(64bit) -
libm.so.6()(64bit) -
libm.so.6(GLIBC_2.2.5)(64bit) -
libm.so.6(GLIBC_2.23)(64bit) -
libpthread.so.0()(64bit) -
libpthread.so.0(GLIBC_2.2.5)(64bit) -
librt.so.1()(64bit) -
librt.so.1(GLIBC_2.2.5)(64bit) -
libstdc++.so.6()(64bit) -
libstdc++.so.6(CXXABI_1.3)(64bit) -
libstdc++.so.6(CXXABI_1.3.11)(64bit) -
libstdc++.so.6(CXXABI_1.3.2)(64bit) -
libstdc++.so.6(CXXABI_1.3.3)(64bit) -
libstdc++.so.6(CXXABI_1.3.8)(64bit) -
libstdc++.so.6(CXXABI_1.3.9)(64bit) -
libstdc++.so.6(GLIBCXX_3.4)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.10)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.11)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.14)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.15)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.17)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.18)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.19)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.20)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.21)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.22)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.9)(64bit) -
libz.so.1()(64bit) -
rtld(GNU_HASH) -

Provides

Name Value
seqan = 2.4.0-1.fc27
seqan2-apps = 2.4.0-1.fc27
seqan2-apps(x86-64) = 2.4.0-1.fc27

Obsoletes

Name Value
seqan <= 1.4.2

Download

Type URL
Mirror download-ib01.fedoraproject.org
Binary Package seqan2-apps-2.4.0-1.fc27.x86_64.rpm
Source Package seqan2-2.4.0-1.fc27.src.rpm

Install Howto

Install seqan2-apps rpm package:

# dnf install seqan2-apps

Files

Path
/usr/bin/alf
/usr/bin/bam2roi
/usr/bin/bed_sort.sh
/usr/bin/bisar
/usr/bin/casbar
/usr/bin/compute_gain
/usr/bin/dfi
/usr/bin/fiona
/usr/bin/four2three
/usr/bin/fx_bam_coverage
/usr/bin/gff_sort.sh
/usr/bin/gustaf
/usr/bin/gustaf_mate_joining
/usr/bin/insegt
/usr/bin/mason_frag_sequencing
/usr/bin/mason_genome
/usr/bin/mason_materializer
/usr/bin/mason_methylation
/usr/bin/mason_simulator
/usr/bin/mason_splicing
/usr/bin/mason_variator
/usr/bin/micro_razers
/usr/bin/pair_align
/usr/bin/param_chooser
/usr/bin/plot.awk
/usr/bin/ps2pswLinks.gawk
/usr/bin/rabema_build_gold_standard
/usr/bin/rabema_evaluate
/usr/bin/rabema_prepare_sam
/usr/bin/razers
/usr/bin/razers3
/usr/bin/rep_sep
/usr/bin/roi_feature_projection
/usr/bin/roi_plot_9.sh
/usr/bin/roi_plot_thumbnails
/usr/bin/roi_sort.sh
/usr/bin/s4_join
/usr/bin/s4_search
/usr/bin/sak
/usr/bin/sam2matrix
/usr/bin/samcat
/usr/bin/seqan_tcoffee
/usr/bin/seqcons2
/usr/bin/sgip
/usr/bin/snp_store
/usr/bin/splazers
/usr/bin/stellar
/usr/bin/tree_recon
/usr/bin/yara_indexer
/usr/bin/yara_mapper
/usr/lib/.build-id/
/usr/lib/.build-id/02/cb2a46fa76958b53d4ebbdc8626f881228746a
/usr/lib/.build-id/06/6239aec6eb4c9c3d7cbfd405b7a70ecdd7f4ad
/usr/lib/.build-id/19/69604a40bf16a4d8aa0cba6fd460a4929d1c41
/usr/lib/.build-id/1b/cf4d40b331e7cdab4379e029448086270e3caf
/usr/lib/.build-id/2d/1b6d65b530f4fb68b0e70004b39740fb33dcb9
/usr/lib/.build-id/3a/bf59021088a0335c3c58cc9f591a4ae8467a7b
/usr/lib/.build-id/3a/ec32db4e7c386571134c4637a3f20d7bf9b2cb
/usr/lib/.build-id/48/9b4dd1a0f540dc8f86534039a61f471f2c00ff
/usr/lib/.build-id/50/5ba6a47f165e49946d216c12a4bfcc338992c8
/usr/lib/.build-id/51/43dbe59cc6ec3ce821c18522df0fc31158dff6
/usr/lib/.build-id/5d/e0664ffefccb8d89dfa4c1a10c9cfbc156afa9
/usr/lib/.build-id/61/1c3a865f346904f102b9df4ddc54f29ea9dee1
/usr/lib/.build-id/64/e7201fd352b4b655ae79cbce27e472001cbbb7
/usr/lib/.build-id/6a/cc47473170c67da36774205f94d306032d0d75
/usr/lib/.build-id/7c/da6ca9d40098e17997132bc21ea6fcbb9c82d6
/usr/lib/.build-id/7e/96220766eb7a4cee38dcdcf6aa6a7518673593
/usr/lib/.build-id/7f/fab2247f430d75592616e02fa4274b0bd8b3f0
/usr/lib/.build-id/8c/17911abd869dd0add49a21f3625022856d6dd4
/usr/lib/.build-id/8d/3bdb978b47e61302eab930d4f4d28f60a3e847
/usr/lib/.build-id/92/ca9d05e5ca683f63d4ce5fbc67e79732b883e1
/usr/lib/.build-id/99/0481ca62e1cfb871afa4c3f9dd031792188a9b
/usr/lib/.build-id/99/d95c92930ebb58182888b1000dec927ba651a0
/usr/lib/.build-id/9c/897ae2e0a286338a932e717cb1944983ccb176
/usr/lib/.build-id/9c/b23988a274d3842013afe5ac18d2eccb5af034
/usr/lib/.build-id/9c/bd40686193df6411281d6b5e56c4556bfeb65d
/usr/lib/.build-id/a9/241d285f23f8fb5a892ea0b9e85aef483558db
/usr/lib/.build-id/bb/c8b5ae3ee5a28e1c48448372b5ea55b04393c7
/usr/lib/.build-id/bf/a526fdbd18e25fbb59d5109417564ced24fbb5
/usr/lib/.build-id/c0/5b42055a723e3362b873f89fdbeced9990f844
/usr/lib/.build-id/c8/63c01e8df3bee731e50e1ab2eba2d87e309f51
/usr/lib/.build-id/c9/11590d978560573c186eb7ea84571cb0e8cba8
/usr/lib/.build-id/c9/8d68b0a2dfb170708e7ca395176dab3012732c
/usr/lib/.build-id/c9/ce5f38f6203daf04aeaadc655f6b122c96c216
/usr/lib/.build-id/d2/3507194a3e6e7772c406e7d863491df1dc7177
/usr/lib/.build-id/d5/469afcc469679aa7b5f12d89831696430a107f
/usr/lib/.build-id/d7/1d77055ccd8733bbf5a6005a25b9b77e628c47
/usr/lib/.build-id/d8/dd6fb693dd7fdf1e1b1f3fc0b5aafc5a597e3c
/usr/lib/.build-id/db/d3c4381e3d73aadc7065ba4eb64d4380567d7a
/usr/lib/.build-id/dd/098c079205315dcd549b28c993e88ea39f24a2
/usr/lib/.build-id/f3/7e98281eab6c9ec6fbb4c388655c9c4a75d32b
/usr/lib/.build-id/f5/0c32f21cda64877578447c1976f4c513a4c280
/usr/lib/.build-id/f6/bf7c94a9d2047afe5ed71f644004f749ea9ad4
/usr/lib/.build-id/f9/55e65f90bc64285a5f1ac239696fd50df292bf
/usr/lib/.build-id/fa/6945138d0f7465540322f1c8e11e34d6929729
/usr/share/doc/seqan2-apps/CHANGELOG.rst
/usr/share/doc/seqan2-apps/README.rst
/usr/share/licenses/seqan2-apps/LICENSE
/usr/share/licenses/seqan2-apps/alf-LICENSE
/usr/share/licenses/seqan2-apps/bs_tools-LICENSE
/usr/share/licenses/seqan2-apps/dfi-LICENSE
/usr/share/licenses/seqan2-apps/fiona-LICENSE
/usr/share/licenses/seqan2-apps/fx_tools-LICENSE
/usr/share/licenses/seqan2-apps/gustaf-LICENSE
/usr/share/licenses/seqan2-apps/insegt-LICENSE
/usr/share/licenses/seqan2-apps/mason2-LICENSE
/usr/share/licenses/seqan2-apps/micro_razers-LICENSE
/usr/share/licenses/seqan2-apps/ngs_roi-LICENSE
/usr/share/licenses/seqan2-apps/pair_align-LICENSE
/usr/share/licenses/seqan2-apps/param_chooser-LICENSE
/usr/share/licenses/seqan2-apps/rabema-COPYING
/usr/share/licenses/seqan2-apps/rabema-LICENSE
/usr/share/licenses/seqan2-apps/razers-LICENSE
/usr/share/licenses/seqan2-apps/razers3-LICENSE
/usr/share/licenses/seqan2-apps/rep_sep-LICENSE
/usr/share/licenses/seqan2-apps/sak-LICENSE
/usr/share/licenses/seqan2-apps/sam2matrix-LICENSE
/usr/share/licenses/seqan2-apps/samcat-LICENSE
/usr/share/licenses/seqan2-apps/searchjoin-LICENSE
/usr/share/licenses/seqan2-apps/seqan_tcoffee-LICENSE
/usr/share/licenses/seqan2-apps/seqcons2-LICENSE
/usr/share/licenses/seqan2-apps/sgip-LICENSE
/usr/share/licenses/seqan2-apps/snp_store-LICENSE
/usr/share/licenses/seqan2-apps/splazers-LICENSE
/usr/share/licenses/seqan2-apps/stellar-LICENSE
/usr/share/licenses/seqan2-apps/tree_recon-LICENSE
/usr/share/licenses/seqan2-apps/yara-LICENSE
/usr/share/man/man1/sak.1.gz
/usr/share/seqan2/
/usr/share/seqan2/pdf_plot_helper/plot.awk
/usr/share/seqan2/pdf_plot_helper/ps2pswLinks.gawk

Changelog

2018-02-02 - Antonio Trande <sagitterATfedoraproject.org> - 2.4.0-1
- Update to version 2.4.0
2018-01-17 - Antonio Trande <sagitterATfedoraproject.org> - 2.4.0-0.4.20180103git8a875d
- Fix dependencies
2018-01-16 - Antonio Trande <sagitterATfedoraproject.org> - 2.4.0-0.3.20180103git8a875d
- Split off applications in a single sub-package
- Devel rpm renamed seqan-headers
2018-01-13 - Antonio Trande <sagitterATfedoraproject.org> - 2.4.0-0.2.20180103git8a875d
- plot.awk/ps2pswLinks.gawk installed in a private share datadir
- plot.awk/ps2pswLinks.gawk symliked in '_bindir'
- Renamed each single license file
2018-01-10 - Antonio Trande <sagitterATfedoraproject.org> - 2.4.0-0.1.20180103git8a875d
- Pre-released as seqan-2.4.0
- Add gcc-c++ BR
- Remove unnecessary R files
- Unbundle font-awesome
- Apps/libraries licensing commented
2018-01-08 - Antonio Trande <sagitterATfedoraproject.org> - 2.3.2-3.20180103git8a875d
- Documentation still disabled
2018-01-03 - Antonio Trande <sagitterATfedoraproject.org> - 2.3.2-2.20180103git8a875d
- Build devel commit #8a875d
- Add manually -DNDEBUG flag
2017-09-20 - Antonio Trande <sagitterATfedoraproject.org> - 2.3.2-1
- Update to 2.3.2
2017-08-03 - Fedora Release Engineering <releng@fedoraproject.org> - 1.4.2-33
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
2017-07-30 - Florian Weimer <fweimer@redhat.com> - 1.4.2-32
- Rebuild with binutils fix for ppc64le (#1475636)

See Also

Package Description
seqan2-doc-2.4.0-1.fc27.noarch.rpm SeqAn (2.x.x) documentation
seqan2-examples-2.4.0-1.fc27.x86_64.rpm SeqAn (2.x.x) examples
seqan2-headers-2.4.0-1.fc27.x86_64.rpm SeqAn (2.x.x) headers only files
sequeler-0.6.3-1.fc27.x86_64.rpm SQL Client built in Vala
ser2net-3.5-1.fc27.x86_64.rpm Proxy that allows tcp connections to serial ports
serd-0.30.0-1.fc27.i686.rpm A lightweight C library for RDF syntax
serd-0.30.0-1.fc27.x86_64.rpm A lightweight C library for RDF syntax
serd-devel-0.30.0-1.fc27.i686.rpm Development libraries and headers for serd
serd-devel-0.30.0-1.fc27.x86_64.rpm Development libraries and headers for serd
setBfree-0.8.8-1.fc27.x86_64.rpm A DSP Tonewheel Organ emulator
setroubleshoot-3.3.17-1.fc27.x86_64.rpm Helps troubleshoot SELinux problems
setroubleshoot-legacy-3.3.17-1.fc27.x86_64.rpm SELinux troubleshoot legacy applet
setroubleshoot-plugins-3.3.9-3.fc27.noarch.rpm Analysis plugins for use with setroubleshoot
setroubleshoot-server-3.3.17-1.fc27.x86_64.rpm SELinux troubleshoot server
shairport-sync-3.2.1-1.fc27.x86_64.rpm AirTunes emulator. Multi-Room with Audio Synchronisation
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