R-GenomicRanges-1.32.3-1.fc28.i686.rpm


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Description

R-GenomicRanges - Representation and manipulation of genomic intervals

Property Value
Distribution Fedora 28
Repository Fedora Updates i386
Package name R-GenomicRanges
Package version 1.32.3
Package release 1.fc28
Package architecture i686
Package type rpm
Installed size 2.79 MB
Download size 1.91 MB
Official Mirror download-ib01.fedoraproject.org
The ability to efficiently store genomic annotations and alignments is
playing a central role when it comes to analyze high-throughput sequencing
data (a.k.a. NGS data). The package defines general purpose containers for
storing genomic intervals as well as more specialized containers for
storing alignments against a reference genome.

Alternatives

Package Version Architecture Repository
R-GenomicRanges-1.32.3-1.fc28.x86_64.rpm 1.32.3 x86_64 Fedora Updates
R-GenomicRanges-1.30.3-1.fc28.x86_64.rpm 1.30.3 x86_64 Fedora Updates Testing
R-GenomicRanges-1.30.3-1.fc28.i686.rpm 1.30.3 i686 Fedora Updates Testing
R-GenomicRanges-1.30.3-1.fc28.x86_64.rpm 1.30.3 x86_64 Fedora
R-GenomicRanges-1.30.3-1.fc28.i686.rpm 1.30.3 i686 Fedora
R-GenomicRanges - - -

Requires

Name Value
R-BiocGenerics >= 0.25.3
R-GenomeInfoDb >= 1.11.5
R-IRanges >= 2.14.4
R-S4Vectors >= 0.17.32
R-XVector -
R-core >= 3.4.0
R-methods -
R-stats -
R-stats4 -
R-utils -
libR.so -
libc.so.6(GLIBC_2.4) -
rtld(GNU_HASH) -

Provides

Name Value
R-GenomicRanges = 1.32.3-1.fc28
R-GenomicRanges(x86-32) = 1.32.3-1.fc28

Download

Type URL
Binary Package R-GenomicRanges-1.32.3-1.fc28.i686.rpm
Source Package R-GenomicRanges-1.32.3-1.fc28.src.rpm

Install Howto

Install R-GenomicRanges rpm package:

# dnf install R-GenomicRanges

Files

Path
/usr/lib/.build-id/
/usr/lib/.build-id/ac/3383c5434461f0446ce0c96af0e38289178ea4
/usr/lib/R/library/GenomicRanges/CITATION
/usr/lib/R/library/GenomicRanges/DESCRIPTION
/usr/lib/R/library/GenomicRanges/INDEX
/usr/lib/R/library/GenomicRanges/NAMESPACE
/usr/lib/R/library/GenomicRanges/NEWS
/usr/lib/R/library/GenomicRanges/Meta/Rd.rds
/usr/lib/R/library/GenomicRanges/Meta/features.rds
/usr/lib/R/library/GenomicRanges/Meta/hsearch.rds
/usr/lib/R/library/GenomicRanges/Meta/links.rds
/usr/lib/R/library/GenomicRanges/Meta/nsInfo.rds
/usr/lib/R/library/GenomicRanges/Meta/package.rds
/usr/lib/R/library/GenomicRanges/Meta/vignette.rds
/usr/lib/R/library/GenomicRanges/R/GenomicRanges
/usr/lib/R/library/GenomicRanges/R/GenomicRanges.rdb
/usr/lib/R/library/GenomicRanges/R/GenomicRanges.rdx
/usr/lib/R/library/GenomicRanges/doc/ExtendingGenomicRanges.R
/usr/lib/R/library/GenomicRanges/doc/ExtendingGenomicRanges.Rnw
/usr/lib/R/library/GenomicRanges/doc/ExtendingGenomicRanges.pdf
/usr/lib/R/library/GenomicRanges/doc/GRanges_and_GRangesList_slides.R
/usr/lib/R/library/GenomicRanges/doc/GRanges_and_GRangesList_slides.Rnw
/usr/lib/R/library/GenomicRanges/doc/GRanges_and_GRangesList_slides.pdf
/usr/lib/R/library/GenomicRanges/doc/GenomicRangesHOWTOs.R
/usr/lib/R/library/GenomicRanges/doc/GenomicRangesHOWTOs.Rnw
/usr/lib/R/library/GenomicRanges/doc/GenomicRangesHOWTOs.pdf
/usr/lib/R/library/GenomicRanges/doc/GenomicRangesIntroduction.R
/usr/lib/R/library/GenomicRanges/doc/GenomicRangesIntroduction.Rnw
/usr/lib/R/library/GenomicRanges/doc/GenomicRangesIntroduction.pdf
/usr/lib/R/library/GenomicRanges/doc/Ten_things_slides.R
/usr/lib/R/library/GenomicRanges/doc/Ten_things_slides.Rnw
/usr/lib/R/library/GenomicRanges/doc/Ten_things_slides.pdf
/usr/lib/R/library/GenomicRanges/doc/index.html
/usr/lib/R/library/GenomicRanges/extdata/feature_frags.txt
/usr/lib/R/library/GenomicRanges/help/AnIndex
/usr/lib/R/library/GenomicRanges/help/GenomicRanges.rdb
/usr/lib/R/library/GenomicRanges/help/GenomicRanges.rdx
/usr/lib/R/library/GenomicRanges/help/aliases.rds
/usr/lib/R/library/GenomicRanges/help/paths.rds
/usr/lib/R/library/GenomicRanges/html/00Index.html
/usr/lib/R/library/GenomicRanges/html/DelegatingGenomicRanges-class.html
/usr/lib/R/library/GenomicRanges/html/GNCList-class.html
/usr/lib/R/library/GenomicRanges/html/GPos-class.html
/usr/lib/R/library/GenomicRanges/html/GRanges-class.html
/usr/lib/R/library/GenomicRanges/html/GRangesList-class.html
/usr/lib/R/library/GenomicRanges/html/GenomicRanges-comparison.html
/usr/lib/R/library/GenomicRanges/html/GenomicRangesList-class.html
/usr/lib/R/library/GenomicRanges/html/R.css
/usr/lib/R/library/GenomicRanges/html/absoluteRanges.html
/usr/lib/R/library/GenomicRanges/html/constraint.html
/usr/lib/R/library/GenomicRanges/html/coverage-methods.html
/usr/lib/R/library/GenomicRanges/html/findOverlaps-methods.html
/usr/lib/R/library/GenomicRanges/html/genomic-range-squeezers.html
/usr/lib/R/library/GenomicRanges/html/genomicvars.html
/usr/lib/R/library/GenomicRanges/html/inter-range-methods.html
/usr/lib/R/library/GenomicRanges/html/intra-range-methods.html
/usr/lib/R/library/GenomicRanges/html/makeGRangesFromDataFrame.html
/usr/lib/R/library/GenomicRanges/html/makeGRangesListFromDataFrame.html
/usr/lib/R/library/GenomicRanges/html/nearest-methods.html
/usr/lib/R/library/GenomicRanges/html/phicoef.html
/usr/lib/R/library/GenomicRanges/html/setops-methods.html
/usr/lib/R/library/GenomicRanges/html/strand-utils.html
/usr/lib/R/library/GenomicRanges/html/tile-methods.html
/usr/lib/R/library/GenomicRanges/html/tileGenome.html
/usr/lib/R/library/GenomicRanges/libs/GenomicRanges.so
/usr/lib/R/library/GenomicRanges/scripts/timing_overlaps.R
/usr/lib/R/library/GenomicRanges/unitTests/test_GNCList-class.R
/usr/lib/R/library/GenomicRanges/unitTests/test_GRanges-class.R
/usr/lib/R/library/GenomicRanges/unitTests/test_GRangesList-class.R
/usr/lib/R/library/GenomicRanges/unitTests/test_GenomicRanges-comparison.R
/usr/lib/R/library/GenomicRanges/unitTests/test_coverage-methods.R
/usr/lib/R/library/GenomicRanges/unitTests/test_findOverlaps-methods.R
/usr/lib/R/library/GenomicRanges/unitTests/test_inter-range-methods.R
/usr/lib/R/library/GenomicRanges/unitTests/test_intra-range-methods.R
/usr/lib/R/library/GenomicRanges/unitTests/test_makeGRangesFromDataFrame.R
/usr/lib/R/library/GenomicRanges/unitTests/test_makeGRangesListFromDataFrame.R
/usr/lib/R/library/GenomicRanges/unitTests/test_nearest-methods.R
/usr/lib/R/library/GenomicRanges/unitTests/test_precede_follow.R
/usr/lib/R/library/GenomicRanges/unitTests/test_setops-methods.R

Changelog

2018-05-17 - Tom Callaway <spot@fedoraproject.org> - 1.32.3-1
- update to 1.32.3
2018-03-14 - Tom Callaway <spot@fedoraproject.org> - 1.30.3-1
- update to 1.30.3
2018-02-07 - Fedora Release Engineering <releng@fedoraproject.org> - 1.28.3-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
2017-08-02 - Fedora Release Engineering <releng@fedoraproject.org> - 1.28.3-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Binutils_Mass_Rebuild
2017-07-26 - Fedora Release Engineering <releng@fedoraproject.org> - 1.28.3-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
2017-05-30 - Tom Callaway <spot@fedoraproject.org> - 1.28.3-1
- update to 1.28.3
2017-02-10 - Fedora Release Engineering <releng@fedoraproject.org> - 1.22.1-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
2016-02-03 - Fedora Release Engineering <releng@fedoraproject.org> - 1.22.1-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_24_Mass_Rebuild
2015-12-07 - Tom Callaway <spot@fedoraproject.org> - 1.22.1-1
- update to 1.22.1
2015-06-16 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.20.3-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild

See Also

Package Description
R-IRanges-2.14.10-1.fc28.i686.rpm Low-level containers for storing sets of integer ranges
R-IRanges-devel-2.14.10-1.fc28.i686.rpm Development files for R-IRanges
R-IRdisplay-0.7.0-1.fc28.noarch.rpm 'Jupyter' Display Machinery
R-IRkernel-0.8.15-1.fc28.noarch.rpm Native R Kernel for the 'Jupyter Notebook'
R-R.cache-0.13.0-1.fc28.noarch.rpm Fast and Light-Weight Caching (Memoization) of Objects and Results
R-R.devices-2.16.0-1.fc28.noarch.rpm Unified Handling of Graphics Devices
R-R.oo-1.22.0-1.fc28.noarch.rpm R Object-Oriented Programming with or without References
R-R.rsp-0.43.1-1.fc28.noarch.rpm Dynamic Generation of Scientific Reports
R-R.utils-2.7.0-1.fc28.noarch.rpm Various Programming Utilities
R-RColorBrewer-1.1.2-1.fc28.noarch.rpm ColorBrewer Palettes
R-RCurl-1.95.4.10-2.fc28.i686.rpm General network (HTTP/FTP) client interface for R
R-RInside-0.2.14-7.fc28.i686.rpm C++ Classes to Embed R in C++ Applications
R-RInside-devel-0.2.14-7.fc28.i686.rpm RInside Development Files
R-RInside-examples-0.2.14-7.fc28.i686.rpm RInside Examples
R-RM2-0.0-19.fc28.noarch.rpm Revenue Management and Pricing for R
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