EMBOSS-6.6.0-12.fc29.i686.rpm


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Description

EMBOSS - The European Molecular Biology Open Software Suite

Property Value
Distribution Fedora 29
Repository Fedora i386
Package filename EMBOSS-6.6.0-12.fc29.i686.rpm
Package name EMBOSS
Package version 6.6.0
Package release 12.fc29
Package architecture i686
Package type rpm
Homepage http://emboss.sf.net/
License GPLv2+ and LGPLv2+ and CC-BY and GPLv3+ and Public Domain
Maintainer -
Download size 76.94 MB
Installed size 481.76 MB
EMBOSS is a new, free Open Source software analysis package specially
developed for the needs of the molecular biology (e.g. EMBnet) user community.
The software automatically copes with data in a variety of formats and even
allows transparent retrieval of sequence data from the web. Also, as extensive
libraries are provided with the package, it is a platform to allow other
scientists to develop and release software in true open source spirit.
EMBOSS also integrates a range of currently available packages and tools for
sequence analysis into a seamless whole.
Reference for EMBOSS: Rice,P. Longden,I. and Bleasby,A.
"EMBOSS: The European Molecular Biology Open Software Suite"
Trends in Genetics June 2000, vol 16, No 6. pp.276-277

Alternatives

Package Version Architecture Repository
EMBOSS-6.6.0-12.fc29.x86_64.rpm 6.6.0 x86_64 Fedora
EMBOSS - - -

Requires

Name Value
EMBOSS-libs = 6.6.0-12.fc29
libX11.so.6 -
libacd.so.6 -
libajax.so.6 -
libajaxdb.so.6 -
libajaxg.so.6 -
libc.so.6(GLIBC_2.7) -
libcrypto.so.1.1 -
libdl.so.2 -
libensembl.so.6 -
libeplplot.so.3 -
libexpat.so.1 -
libgd.so.3 -
libhpdf.so.2.3.0 -
libm.so.6 -
libm.so.6(GLIBC_2.0) -
libm.so.6(GLIBC_2.1) -
libmariadb.so.3 -
libnucleus.so.6 -
libpam.so.0 -
libpcre.so.1 -
libpng16.so.16 -
libpq.so.5 -
libpthread.so.0 -
libpthread.so.0(GLIBC_2.0) -
libssl.so.1.1 -
libz.so.1 -
rtld(GNU_HASH) -

Provides

Name Value
EMBOSS = 6.6.0-12.fc29
EMBOSS(x86-32) = 6.6.0-12.fc29
config(EMBOSS) = 6.6.0-12.fc29

Download

Type URL
Mirror download-ib01.fedoraproject.org
Binary Package EMBOSS-6.6.0-12.fc29.i686.rpm
Source Package EMBOSS-6.6.0-12.fc29.src.rpm

Install Howto

Install EMBOSS rpm package:

# dnf --refresh install EMBOSS

Files

Path
/etc/profile.d/emboss.csh
/etc/profile.d/emboss.sh
/usr/bin/aaindexextract
/usr/bin/abiview
/usr/bin/acdc
/usr/bin/acdgalaxy
/usr/bin/acdlog
/usr/bin/acdpretty
/usr/bin/acdtable
/usr/bin/acdtrace
/usr/bin/acdvalid
/usr/bin/aligncopy
/usr/bin/aligncopypair
/usr/bin/antigenic
/usr/bin/assemblyget
/usr/bin/backtranambig
/usr/bin/backtranseq
/usr/bin/banana
/usr/bin/biosed
/usr/bin/btwisted
/usr/bin/cachedas
/usr/bin/cachedbfetch
/usr/bin/cacheebeyesearch
/usr/bin/cacheensembl
/usr/bin/cai
/usr/bin/charge
/usr/bin/checktrans
/usr/bin/chips
/usr/bin/cirdna
/usr/bin/codcmp
/usr/bin/codcopy
/usr/bin/coderet
/usr/bin/compseq
/usr/bin/cons
/usr/bin/consambig
/usr/bin/cpgplot
/usr/bin/cpgreport
/usr/bin/cusp
/usr/bin/cutgextract
/usr/bin/cutseq
/usr/bin/dan
/usr/bin/dbiblast
/usr/bin/dbifasta
/usr/bin/dbiflat
/usr/bin/dbigcg
/usr/bin/dbtell
/usr/bin/dbxcompress
/usr/bin/dbxedam
/usr/bin/dbxfasta
/usr/bin/dbxflat
/usr/bin/dbxgcg
/usr/bin/dbxobo
/usr/bin/dbxreport
/usr/bin/dbxresource
/usr/bin/dbxstat
/usr/bin/dbxtax
/usr/bin/dbxuncompress
/usr/bin/degapseq
/usr/bin/density
/usr/bin/descseq
/usr/bin/diffseq
/usr/bin/distmat
/usr/bin/dotmatcher
/usr/bin/dotpath
/usr/bin/dottup
/usr/bin/dreg
/usr/bin/drfinddata
/usr/bin/drfindformat
/usr/bin/drfindid
/usr/bin/drfindresource
/usr/bin/drget
/usr/bin/drtext
/usr/bin/edamdef
/usr/bin/edamhasinput
/usr/bin/edamhasoutput
/usr/bin/edamisformat
/usr/bin/edamisid
/usr/bin/edamname
/usr/bin/edialign
/usr/bin/einverted
/usr/bin/em_chaos
/usr/bin/em_remap
/usr/bin/em_wordcount
/usr/bin/embossdata
/usr/bin/embossupdate
/usr/bin/embossversion
/usr/bin/emma
/usr/bin/emowse
/usr/bin/entret
/usr/bin/epestfind
/usr/bin/eprimer3
/usr/bin/eprimer32
/usr/bin/epscan
/usr/bin/equicktandem
/usr/bin/est2genome
/usr/bin/etandem
/usr/bin/extractalign
/usr/bin/extractfeat
/usr/bin/extractseq
/usr/bin/featcopy
/usr/bin/featmerge
/usr/bin/featreport
/usr/bin/feattext
/usr/bin/findkm
/usr/bin/freak
/usr/bin/fuzznuc
/usr/bin/fuzzpro
/usr/bin/fuzztran
/usr/bin/garnier
/usr/bin/geecee
/usr/bin/getorf
/usr/bin/godef
/usr/bin/goname
/usr/bin/helixturnhelix
/usr/bin/hmoment
/usr/bin/iep
/usr/bin/infoalign
/usr/bin/infoassembly
/usr/bin/infobase
/usr/bin/inforesidue
/usr/bin/infoseq
/usr/bin/isochore
/usr/bin/jaspextract
/usr/bin/jaspscan
/usr/bin/lindna
/usr/bin/listor
/usr/bin/makenucseq
/usr/bin/makeprotseq
/usr/bin/marscan
/usr/bin/maskambignuc
/usr/bin/maskambigprot
/usr/bin/maskfeat
/usr/bin/maskseq
/usr/bin/matcher
/usr/bin/megamerger
/usr/bin/merger
/usr/bin/msbar
/usr/bin/mwcontam
/usr/bin/mwfilter
/usr/bin/needle
/usr/bin/needleall
/usr/bin/newcpgreport
/usr/bin/newcpgseek
/usr/bin/newseq
/usr/bin/nohtml
/usr/bin/noreturn
/usr/bin/nospace
/usr/bin/notab
/usr/bin/notseq
/usr/bin/nthseq
/usr/bin/nthseqset
/usr/bin/octanol
/usr/bin/oddcomp
/usr/bin/ontocount
/usr/bin/ontoget
/usr/bin/ontogetcommon
/usr/bin/ontogetdown
/usr/bin/ontogetobsolete
/usr/bin/ontogetroot
/usr/bin/ontogetsibs
/usr/bin/ontogetup
/usr/bin/ontoisobsolete
/usr/bin/ontotext
/usr/bin/palindrome
/usr/bin/pasteseq
/usr/bin/patmatdb
/usr/bin/patmatmotifs
/usr/bin/pepcoil
/usr/bin/pepdigest
/usr/bin/pepinfo
/usr/bin/pepnet
/usr/bin/pepstats
/usr/bin/pepwheel
/usr/bin/pepwindow
/usr/bin/pepwindowall
/usr/bin/plotcon
/usr/bin/plotorf
/usr/bin/polydot
/usr/bin/preg
/usr/bin/prettyplot
/usr/bin/prettyseq
/usr/bin/primersearch
/usr/bin/printsextract
/usr/bin/profit
/usr/bin/prophecy
/usr/bin/prophet
/usr/bin/prosextract
/usr/bin/psiphi
/usr/bin/rebaseextract
/usr/bin/recoder
/usr/bin/redata
/usr/bin/refseqget
/usr/bin/restover
/usr/bin/restrict
/usr/bin/revseq
/usr/bin/runJemboss.sh
/usr/bin/seealso
/usr/bin/seqcount
/usr/bin/seqmatchall
/usr/bin/seqret
/usr/bin/seqretsetall
/usr/bin/seqretsplit
/usr/bin/seqxref
/usr/bin/seqxrefget
/usr/bin/servertell
/usr/bin/showalign
/usr/bin/showdb
/usr/bin/showfeat
/usr/bin/showorf
/usr/bin/showpep
/usr/bin/showseq
/usr/bin/showserver
/usr/bin/shuffleseq
/usr/bin/sigcleave
/usr/bin/silent
/usr/bin/sirna
/usr/bin/sixpack
/usr/bin/sizeseq
/usr/bin/skipredundant
/usr/bin/skipseq
/usr/bin/splitsource
/usr/bin/splitter
/usr/bin/stretcher
/usr/bin/stssearch
/usr/bin/supermatcher
/usr/bin/syco
/usr/bin/taxget
/usr/bin/taxgetdown
/usr/bin/taxgetrank
/usr/bin/taxgetspecies
/usr/bin/taxgetup
/usr/bin/tcode
/usr/bin/textget
/usr/bin/textsearch
/usr/bin/tfextract
/usr/bin/tfm
/usr/bin/tfscan
/usr/bin/tmap
/usr/bin/tranalign
/usr/bin/transeq
/usr/bin/trimest
/usr/bin/trimseq
/usr/bin/trimspace
/usr/bin/twofeat
/usr/bin/union
/usr/bin/urlget
/usr/bin/variationget
/usr/bin/vectorstrip
/usr/bin/water
/usr/bin/whichdb
/usr/bin/wobble
/usr/bin/wordfinder
/usr/bin/wordmatch
/usr/bin/wossdata
/usr/bin/wossinput
/usr/bin/wossname
/usr/bin/wossoperation
/usr/bin/wossoutput
/usr/bin/wossparam
/usr/bin/wosstopic
/usr/bin/xmlget
/usr/bin/xmltext
/usr/bin/yank
/usr/lib/.build-id/
/usr/lib/.build-id/00/046e178b430d17ffbb7b3007bb38863eeeb419
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/usr/share/EMBOSS/test/swnew/trembl.dat
/usr/share/EMBOSS/test/testdb/acnum.hit
/usr/share/EMBOSS/test/testdb/acnum.trg
/usr/share/EMBOSS/test/testdb/des.hit
/usr/share/EMBOSS/test/testdb/des.trg
/usr/share/EMBOSS/test/testdb/division.lkp
/usr/share/EMBOSS/test/testdb/entrynam.idx
/usr/share/EMBOSS/test/testdb/testdb.fasta
/usr/share/doc/EMBOSS/AUTHORS
/usr/share/doc/EMBOSS/ChangeLog
/usr/share/doc/EMBOSS/FAQ
/usr/share/doc/EMBOSS/INSTALL
/usr/share/doc/EMBOSS/NEWS
/usr/share/doc/EMBOSS/README
/usr/share/doc/EMBOSS/THANKS

Changelog

2018-07-12 - Fedora Release Engineering <releng@fedoraproject.org> - 6.6.0-12
- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
2018-05-14 - Tom Callaway <spot@fedoraproject.org> - 6.6.0-11
- rename "wordcount" to "em_wordcount" to resolve conflict with texlive
2018-02-07 - Fedora Release Engineering <releng@fedoraproject.org> - 6.6.0-10
- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
2017-10-28 - Tom Callaway <spot@fedoraproject.org> - 6.6.0-9
- fix mariadb issues (bz1493684)
2017-07-26 - Fedora Release Engineering <releng@fedoraproject.org> - 6.6.0-8
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
2017-07-13 - Tom Callaway <spot@fedoraproject.org> - 6.6.0-7
- rebuild against new mariadb
2017-06-15 - Tom Callaway <spot@fedoraproject.org> - 6.6.0-6
- rebuild against new libharu (2.3.0)
2017-05-16 - Tom Callaway <spot@fedoraproject.org> - 6.6.0-5
- rename "remap" to "em_remap" (bz1450190)
2017-02-10 - Fedora Release Engineering <releng@fedoraproject.org> - 6.6.0-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild

See Also

Package Description
EMBOSS-devel-6.6.0-12.fc29.i686.rpm Development tools for programs which will use the EMBOSS library
EMBOSS-libs-6.6.0-12.fc29.i686.rpm Shared libraries for EMBOSS
ETL-devel-1.2.1-4.fc29.i686.rpm Development files for ETL
EekBoek-2.03-6.fc29.noarch.rpm Bookkeeping software for small and medium-size businesses
EekBoek-db-postgresql-2.03-6.fc29.noarch.rpm PostgreSQL database driver for EekBoek
EekBoek-gui-2.03-6.fc29.noarch.rpm EekBoek graphical user interface
ElectricFence-2.2.2-48.fc29.i686.rpm A debugger which detects memory allocation violations
ExchangeIR-0.0.8.2-9.fc29.noarch.rpm Java infrared signals analysis and conversion library
ExchangeIR-javadoc-0.0.8.2-9.fc29.noarch.rpm Javadoc for ExchangeIR
FUR-0.4.6-17.fc29.i686.rpm Mount a Windows CE based device on your Linux file system
Falcon-0.9.6.8-15.fc29.i686.rpm The Falcon Programming Language
Falcon-devel-0.9.6.8-15.fc29.i686.rpm Development files for Falcon
Falcon-doc-0.9.6.8-15.fc29.noarch.rpm Documentation for Falcon
Field3D-1.7.2-11.fc29.i686.rpm Library for storing voxel data
Field3D-devel-1.7.2-11.fc29.i686.rpm Development files for Field3D
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