bfast - Blat-like Fast Accurate Search Tool

Property Value
Distribution Fedora 29
Repository Fedora i386
Package filename bfast-0.7.0a-19.fc29.i686.rpm
Package name bfast
Package version 0.7.0a
Package release 19.fc29
Package architecture i686
Package type rpm
Category Applications/Engineering
License GPLv2 and MIT
Maintainer -
Download size 752.36 KB
Installed size 2.89 MB
BFAST facilitates the fast and accurate mapping of short reads to
reference sequences.  Some advantages of BFAST include:
Speed: enables billions of short reads to be mapped quickly.
Accuracy: A priori probabilities for mapping reads with defined set of variants.
An easy way to measurably tune accuracy at the expense of speed.
Specifically, BFAST was designed to facilitate whole-genome
resequencing, where mapping billions of short reads with variants is
of utmost importance.
BFAST supports both Illumina and ABI SOLiD data, as well as any other
Next-Generation Sequencing Technology (454, Helicos), with particular
emphasis on sensitivity towards errors, SNPs and especially
indels. Other algorithms take short-cuts by ignoring errors, certain
types of variants (indels), and even require further alignment, all to
be the "fastest" (but still not complete). BFAST is able to be tuned
to find variants regardless of the error-rate, polymorphism rate, or
other factors.


Package Version Architecture Repository
bfast-0.7.0a-19.fc29.x86_64.rpm 0.7.0a x86_64 Fedora
bfast - - -


Name Value
/usr/bin/perl - - - - - - - - - -
perl(Cwd) -
perl(Data::Dumper) -
perl(File::Path) -
perl(Getopt::Long) -
perl(Getopt::Std) -
perl(Pod::Usage) -
perl(XML::Simple) -
perl(constant) -
perl(strict) -
perl(warnings) -
rtld(GNU_HASH) -


Name Value
bfast = 0.7.0a-19.fc29
bfast(x86-32) = 0.7.0a-19.fc29


Type URL
Binary Package bfast-0.7.0a-19.fc29.i686.rpm
Source Package bfast-0.7.0a-19.fc29.src.rpm

Install Howto

Install bfast rpm package:

# dnf install bfast




2018-07-12 - Fedora Release Engineering <> - 0.7.0a-19
- Rebuilt for
2018-02-07 - Fedora Release Engineering <> - 0.7.0a-18
- Rebuilt for
2017-08-02 - Fedora Release Engineering <> - 0.7.0a-17
- Rebuilt for
2017-07-26 - Fedora Release Engineering <> - 0.7.0a-16
- Rebuilt for
2017-02-10 - Fedora Release Engineering <> - 0.7.0a-15
- Rebuilt for

See Also

Package Description
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bharati-m17n-1.2-12.fc29.noarch.rpm Bharati input method based on InScript layout
bib2html-1.2.1-21.fc29.i686.rpm Converting bibTeX file to HTML
biber-2.7-3.fc29.noarch.rpm Command-line bibliographic manager, BibTeX replacement
biblesync-2.0.1-3.fc29.i686.rpm A Cross-platform library for sharing Bible navigation
biblesync-devel-2.0.1-3.fc29.i686.rpm Development files for biblesync
bibletime-2.11.2-2.fc29.i686.rpm An easy to use Bible study tool
bibtex2html-1.99-2.fc29.i686.rpm Collection of tools for translating from BibTeX to HTML
bibus-1.5.2-8.fc29.i686.rpm Bibliographic and reference management software
bibutils-6.7-1.fc29.i686.rpm Bibliography conversion tools
bibutils-devel-6.7-1.fc29.i686.rpm Development files for bibutils
bibutils-libs-6.7-1.fc29.i686.rpm Bibutils library
bicon-0.5-7.fc29.i686.rpm Bidirectional Console
bicon-devel-0.5-7.fc29.i686.rpm Development Libraries for BiCon
bicon-fonts-0.5-7.fc29.noarch.rpm Font Files for BiCon