vhybridize-0.5.9-20.fc29.noarch.rpm


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Description

vhybridize - Virtual Hybridization command line tools

Property Value
Distribution Fedora 29
Repository Fedora x86_64
Package filename vhybridize-0.5.9-20.fc29.noarch.rpm
Package name vhybridize
Package version 0.5.9
Package release 20.fc29
Package architecture noarch
Package type rpm
Homepage http://ygingras.net/bioinfo
License GPLv3+
Maintainer -
Download size 102.32 KB
Installed size 297.79 KB
Virtual Hybridization uses sets of short probes to generate datasets
for comparative genomics: given a DNA sequence and a set of probes,
the typical output will give a sequence of oriented probe hits along
the DNA sequence. Other tools are supplied to allow simple manipulations
such as format conversion and extraction of permutations.

Alternatives

Package Version Architecture Repository
vhybridize-0.5.9-20.fc29.noarch.rpm 0.5.9 noarch Fedora
vhybridize - - -

Requires

Name Value
/usr/bin/python2 -
python(abi) = 2.7

Provides

Name Value
python2.7dist(vhybridize) = 0.5.9
python2dist(vhybridize) = 0.5.9
vhybridize = 0.5.9-20.fc29

Download

Type URL
Mirror download-ib01.fedoraproject.org
Binary Package vhybridize-0.5.9-20.fc29.noarch.rpm
Source Package vhybridize-0.5.9-20.fc29.src.rpm

Install Howto

Install vhybridize rpm package:

# dnf install vhybridize

Files

Path
/usr/bin/vhy-filter
/usr/bin/vhy-merge
/usr/bin/vhy-split-multi-fasta
/usr/bin/vhy-to-permutation
/usr/bin/vhy-to-vhx
/usr/bin/vhybridize
/usr/lib/python2.7/site-packages/vhybridize/__init__.py
/usr/lib/python2.7/site-packages/vhybridize/__init__.pyc
/usr/lib/python2.7/site-packages/vhybridize/__init__.pyo
/usr/lib/python2.7/site-packages/vhybridize/config.py
/usr/lib/python2.7/site-packages/vhybridize/config.pyc
/usr/lib/python2.7/site-packages/vhybridize/config.pyo
/usr/lib/python2.7/site-packages/vhybridize/locate.py
/usr/lib/python2.7/site-packages/vhybridize/locate.pyc
/usr/lib/python2.7/site-packages/vhybridize/locate.pyo
/usr/lib/python2.7/site-packages/vhybridize/utils.py
/usr/lib/python2.7/site-packages/vhybridize/utils.pyc
/usr/lib/python2.7/site-packages/vhybridize/utils.pyo
/usr/lib/python2.7/site-packages/vhybridize-0.5.9-py2.7.egg-info/PKG-INFO
/usr/lib/python2.7/site-packages/vhybridize-0.5.9-py2.7.egg-info/SOURCES.txt
/usr/lib/python2.7/site-packages/vhybridize-0.5.9-py2.7.egg-info/dependency_links.txt
/usr/lib/python2.7/site-packages/vhybridize-0.5.9-py2.7.egg-info/entry_points.txt
/usr/lib/python2.7/site-packages/vhybridize-0.5.9-py2.7.egg-info/top_level.txt
/usr/lib/python2.7/site-packages/vhybridize/scripts/__init__.py
/usr/lib/python2.7/site-packages/vhybridize/scripts/__init__.pyc
/usr/lib/python2.7/site-packages/vhybridize/scripts/__init__.pyo
/usr/lib/python2.7/site-packages/vhybridize/scripts/filter.py
/usr/lib/python2.7/site-packages/vhybridize/scripts/filter.pyc
/usr/lib/python2.7/site-packages/vhybridize/scripts/filter.pyo
/usr/lib/python2.7/site-packages/vhybridize/scripts/merge.py
/usr/lib/python2.7/site-packages/vhybridize/scripts/merge.pyc
/usr/lib/python2.7/site-packages/vhybridize/scripts/merge.pyo
/usr/lib/python2.7/site-packages/vhybridize/scripts/split_multi_fasta.py
/usr/lib/python2.7/site-packages/vhybridize/scripts/split_multi_fasta.pyc
/usr/lib/python2.7/site-packages/vhybridize/scripts/split_multi_fasta.pyo
/usr/lib/python2.7/site-packages/vhybridize/scripts/to_permutation.py
/usr/lib/python2.7/site-packages/vhybridize/scripts/to_permutation.pyc
/usr/lib/python2.7/site-packages/vhybridize/scripts/to_permutation.pyo
/usr/lib/python2.7/site-packages/vhybridize/scripts/to_vhx.py
/usr/lib/python2.7/site-packages/vhybridize/scripts/to_vhx.pyc
/usr/lib/python2.7/site-packages/vhybridize/scripts/to_vhx.pyo
/usr/share/doc/vhybridize/AUTHORS.txt
/usr/share/doc/vhybridize/COPYING.txt
/usr/share/doc/vhybridize/README.txt
/usr/share/doc/vhybridize/TODO.txt
/usr/share/doc/vhybridize/docs/formats.txt
/usr/share/doc/vhybridize/docs/manual.txt
/usr/share/doc/vhybridize/examples/NC_000932.fas
/usr/share/doc/vhybridize/examples/chloroplasts-probes-beta7.fas

Changelog

2018-07-14 - Fedora Release Engineering <releng@fedoraproject.org> - 0.5.9-20
- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
2018-02-09 - Iryna Shcherbina <ishcherb@redhat.com> - 0.5.9-19
- Update Python 2 dependency declarations to new packaging standards
(See https://fedoraproject.org/wiki/FinalizingFedoraSwitchtoPython3)
2018-02-09 - Fedora Release Engineering <releng@fedoraproject.org> - 0.5.9-18
- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
2017-07-27 - Fedora Release Engineering <releng@fedoraproject.org> - 0.5.9-17
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
2017-02-11 - Fedora Release Engineering <releng@fedoraproject.org> - 0.5.9-16
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild
2016-07-19 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 0.5.9-15
- https://fedoraproject.org/wiki/Changes/Automatic_Provides_for_Python_RPM_Packages

See Also

Package Description
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vid.stab-devel-1.1.0-9.20180529git38ecbaf.fc29.i686.rpm Development files for vid.stab
vid.stab-devel-1.1.0-9.20180529git38ecbaf.fc29.x86_64.rpm Development files for vid.stab
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viennacl-doc-1.7.1-8.fc29.noarch.rpm Documentation for viennacl
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viewvc-httpd-fcgi-1.1.26-7.fc29.noarch.rpm ViewVC configuration for Apache/mod_fcgid
viewvc-httpd-wsgi-1.1.26-7.fc29.noarch.rpm ViewVC configuration for Apache/mod_wsgi
vifm-0.8.2-5.fc28.x86_64.rpm Lightweight file manager with vi like key-bindings
vigra-1.11.1-10.fc29.i686.rpm Generic Programming for Computer Vision
vigra-1.11.1-10.fc29.x86_64.rpm Generic Programming for Computer Vision
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