python3-pysb-1.7.0-2.fc30.noarch.rpm


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Description

python3-pysb - Rule-based modeling of biochemical systems as Python programs

Property Value
Distribution Fedora 30
Repository Fedora x86_64
Package filename python3-pysb-1.7.0-2.fc30.noarch.rpm
Package name python3-pysb
Package version 1.7.0
Package release 2.fc30
Package architecture noarch
Package type rpm
Homepage http://pysb.org/
License BSD
Maintainer -
Download size 377.75 KB
Installed size 1.60 MB
PySB is a framework for building mathematical models of biochemical
systems as Python programs. PySB abstracts the complex process of
creating equations describing interactions among multiple proteins or
other biomolecules into a simple and intuitive domain specific
programming language, which is internally translated into BioNetGen or
Kappa rules and from there into systems of equations. PySB makes it
straightforward to divide models into modules and to call libraries of
reusable elements (macros) that encode standard biochemical
actions. These features promote model transparency, reuse and
accuracy. PySB also interoperates with standard scientific Python
libraries such as NumPy, SciPy and SymPy enabling model simulation and
analysis.

Alternatives

Package Version Architecture Repository
python3-pysb-1.8.1-1.fc30.noarch.rpm 1.8.1 noarch Fedora Updates
python3-pysb-1.8.1-1.fc30.noarch.rpm 1.8.1 noarch Fedora Updates
python3-pysb-1.7.0-2.fc30.noarch.rpm 1.7.0 noarch Fedora
python3-pysb - - -

Requires

Name Value
/usr/bin/python3 -
bionetgen -
bionetgen-perl -
python(abi) = 3.7
python3-matplotlib -
python3-networkx -
python3-numpy -
python3-pygraphviz -
python3-scipy -
python3-sympy -
python3.7dist(networkx) -
python3.7dist(numpy) -
python3.7dist(scipy) -
python3.7dist(sympy) -

Provides

Name Value
python3-pysb = 1.7.0-2.fc30
python3.7dist(pysb) = 1.7.0
python3dist(pysb) = 1.7.0

Download

Type URL
Mirror download-ib01.fedoraproject.org
Binary Package python3-pysb-1.7.0-2.fc30.noarch.rpm
Source Package python-pysb-1.7.0-2.fc30.src.rpm

Install Howto

Install python3-pysb rpm package:

# dnf --refresh install python3-pysb

Files

Path
/usr/bin/pysb_export
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/usr/lib/python3.7/site-packages/pysb/_version.py
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/usr/lib/python3.7/site-packages/pysb/annotation.py
/usr/lib/python3.7/site-packages/pysb/bng.py
/usr/lib/python3.7/site-packages/pysb/builder.py
/usr/lib/python3.7/site-packages/pysb/core.py
/usr/lib/python3.7/site-packages/pysb/integrate.py
/usr/lib/python3.7/site-packages/pysb/jacobian.py
/usr/lib/python3.7/site-packages/pysb/kappa.py
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/usr/lib/python3.7/site-packages/pysb/pathfinder.py
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Changelog

2019-02-02 - Fedora Release Engineering <releng@fedoraproject.org> - 1.7.0-2
- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild
2018-09-25 - Petr Viktorin <releng@fedoraproject.org> - 1.7.0-1
- Update to 1.7.0
- Switch to Python 3
2018-07-14 - Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-11
- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
2018-02-09 - Iryna Shcherbina <ishcherb@redhat.com> - 1.0.1-10
- Update Python 2 dependency declarations to new packaging standards
(See https://fedoraproject.org/wiki/FinalizingFedoraSwitchtoPython3)
2018-02-09 - Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-9
- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild
2017-08-19 - Zbigniew Jędrzejewski-Szmek <zbyszek@in.waw.pl> - 1.0.1-8
- Python 2 binary package renamed to python2-pysb
See https://fedoraproject.org/wiki/FinalizingFedoraSwitchtoPython3
2017-07-27 - Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-7
- Rebuilt for https://fedoraproject.org/wiki/Fedora_27_Mass_Rebuild
2017-02-11 - Fedora Release Engineering <releng@fedoraproject.org> - 1.0.1-6
- Rebuilt for https://fedoraproject.org/wiki/Fedora_26_Mass_Rebuild

See Also

Package Description
python3-pyscaffold-3.1-2.fc30.noarch.rpm Template tool for putting up the scaffold of a Python project
python3-pyscard-1.9.7-3.fc30.x86_64.rpm A framework for building smart card aware applications in Python
python3-pysctp-0.6-19.fc30.x86_64.rpm Python sctp socket api extensions bindings
python3-pysendfile-2.0.1-12.fc30.x86_64.rpm Python interface to the sendfile(2) system call
python3-pyserial-3.4-2.fc30.noarch.rpm Python serial port access library
python3-pyshp-2.1.0-1.fc30.noarch.rpm Pure Python 3 read/write support for ESRI Shapefile format
python3-pyshtools-4.4.1-2.fc30.x86_64.rpm Tools for working with spherical harmonics
python3-pyside-1.2.4-8.fc30.i686.rpm Python bindings for Qt4
python3-pyside-1.2.4-8.fc30.x86_64.rpm Python bindings for Qt4
python3-pysnmp-4.4.9-2.fc30.noarch.rpm An SNMP engine written in Python
python3-pysocks-1.6.8-7.fc30.noarch.rpm A Python SOCKS client module
python3-pysol-cards-0.4.1-1.fc30.noarch.rpm Deal PySol FC Cards
python3-pyspf-2.0.12-10.fc30.noarch.rpm Python module and programs for SPF (Sender Policy Framework)
python3-pysrt-1.1.1-8.fc30.noarch.rpm Library used to edit or create SubRip files
python3-pystache-0.5.4-11.fc30.noarch.rpm Mustache for Python
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