vhybridize-0.5.9-22.fc31.noarch.rpm


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Description

vhybridize - Virtual Hybridization command line tools

Property Value
Distribution Fedora 31
Repository Fedora x86_64
Package filename vhybridize-0.5.9-22.fc31.noarch.rpm
Package name vhybridize
Package version 0.5.9
Package release 22.fc31
Package architecture noarch
Package type rpm
Homepage http://ygingras.net/bioinfo
License GPLv3+
Maintainer -
Download size 94.68 KB
Installed size 297.79 KB
Virtual Hybridization uses sets of short probes to generate datasets
for comparative genomics: given a DNA sequence and a set of probes,
the typical output will give a sequence of oriented probe hits along
the DNA sequence. Other tools are supplied to allow simple manipulations
such as format conversion and extraction of permutations.

Alternatives

Package Version Architecture Repository
vhybridize - - -

Requires

Name Value
/usr/bin/python2 -
python(abi) = 2.7
python2.7dist(setuptools) -

Provides

Name Value
python2.7dist(vhybridize) = 0.5.9
python2dist(vhybridize) = 0.5.9
vhybridize = 0.5.9-22.fc31

Download

Type URL
Mirror download-ib01.fedoraproject.org
Binary Package vhybridize-0.5.9-22.fc31.noarch.rpm
Source Package vhybridize-0.5.9-22.fc31.src.rpm

Install Howto

Install vhybridize rpm package:

# dnf install vhybridize

Files

Path
/usr/bin/vhy-filter
/usr/bin/vhy-merge
/usr/bin/vhy-split-multi-fasta
/usr/bin/vhy-to-permutation
/usr/bin/vhy-to-vhx
/usr/bin/vhybridize
/usr/lib/python2.7/site-packages/vhybridize/__init__.py
/usr/lib/python2.7/site-packages/vhybridize/__init__.pyc
/usr/lib/python2.7/site-packages/vhybridize/__init__.pyo
/usr/lib/python2.7/site-packages/vhybridize/config.py
/usr/lib/python2.7/site-packages/vhybridize/config.pyc
/usr/lib/python2.7/site-packages/vhybridize/config.pyo
/usr/lib/python2.7/site-packages/vhybridize/locate.py
/usr/lib/python2.7/site-packages/vhybridize/locate.pyc
/usr/lib/python2.7/site-packages/vhybridize/locate.pyo
/usr/lib/python2.7/site-packages/vhybridize/utils.py
/usr/lib/python2.7/site-packages/vhybridize/utils.pyc
/usr/lib/python2.7/site-packages/vhybridize/utils.pyo
/usr/lib/python2.7/site-packages/vhybridize-0.5.9-py2.7.egg-info/PKG-INFO
/usr/lib/python2.7/site-packages/vhybridize-0.5.9-py2.7.egg-info/SOURCES.txt
/usr/lib/python2.7/site-packages/vhybridize-0.5.9-py2.7.egg-info/dependency_links.txt
/usr/lib/python2.7/site-packages/vhybridize-0.5.9-py2.7.egg-info/entry_points.txt
/usr/lib/python2.7/site-packages/vhybridize-0.5.9-py2.7.egg-info/top_level.txt
/usr/lib/python2.7/site-packages/vhybridize/scripts/__init__.py
/usr/lib/python2.7/site-packages/vhybridize/scripts/__init__.pyc
/usr/lib/python2.7/site-packages/vhybridize/scripts/__init__.pyo
/usr/lib/python2.7/site-packages/vhybridize/scripts/filter.py
/usr/lib/python2.7/site-packages/vhybridize/scripts/filter.pyc
/usr/lib/python2.7/site-packages/vhybridize/scripts/filter.pyo
/usr/lib/python2.7/site-packages/vhybridize/scripts/merge.py
/usr/lib/python2.7/site-packages/vhybridize/scripts/merge.pyc
/usr/lib/python2.7/site-packages/vhybridize/scripts/merge.pyo
/usr/lib/python2.7/site-packages/vhybridize/scripts/split_multi_fasta.py
/usr/lib/python2.7/site-packages/vhybridize/scripts/split_multi_fasta.pyc
/usr/lib/python2.7/site-packages/vhybridize/scripts/split_multi_fasta.pyo
/usr/lib/python2.7/site-packages/vhybridize/scripts/to_permutation.py
/usr/lib/python2.7/site-packages/vhybridize/scripts/to_permutation.pyc
/usr/lib/python2.7/site-packages/vhybridize/scripts/to_permutation.pyo
/usr/lib/python2.7/site-packages/vhybridize/scripts/to_vhx.py
/usr/lib/python2.7/site-packages/vhybridize/scripts/to_vhx.pyc
/usr/lib/python2.7/site-packages/vhybridize/scripts/to_vhx.pyo
/usr/share/doc/vhybridize/AUTHORS.txt
/usr/share/doc/vhybridize/COPYING.txt
/usr/share/doc/vhybridize/README.txt
/usr/share/doc/vhybridize/TODO.txt
/usr/share/doc/vhybridize/docs/formats.txt
/usr/share/doc/vhybridize/docs/manual.txt
/usr/share/doc/vhybridize/examples/NC_000932.fas
/usr/share/doc/vhybridize/examples/chloroplasts-probes-beta7.fas

Changelog

2019-07-27 - Fedora Release Engineering <releng@fedoraproject.org> - 0.5.9-22
- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild
2019-02-03 - Fedora Release Engineering <releng@fedoraproject.org> - 0.5.9-21
- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild
2018-07-14 - Fedora Release Engineering <releng@fedoraproject.org> - 0.5.9-20
- Rebuilt for https://fedoraproject.org/wiki/Fedora_29_Mass_Rebuild
2018-02-09 - Iryna Shcherbina <ishcherb@redhat.com> - 0.5.9-19
- Update Python 2 dependency declarations to new packaging standards
(See https://fedoraproject.org/wiki/FinalizingFedoraSwitchtoPython3)
2018-02-09 - Fedora Release Engineering <releng@fedoraproject.org> - 0.5.9-18
- Rebuilt for https://fedoraproject.org/wiki/Fedora_28_Mass_Rebuild

See Also

Package Description
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vid.stab-1.1.0-12.20190213gitaeabc8d.fc31.i686.rpm Video stabilize library for fmpeg, mlt or transcode
vid.stab-1.1.0-12.20190213gitaeabc8d.fc31.x86_64.rpm Video stabilize library for fmpeg, mlt or transcode
vid.stab-devel-1.1.0-12.20190213gitaeabc8d.fc31.i686.rpm Development files for vid.stab
vid.stab-devel-1.1.0-12.20190213gitaeabc8d.fc31.x86_64.rpm Development files for vid.stab
video-downloader-0.1.5-6.fc31.noarch.rpm Download videos from websites like YouTube and many others
viennacl-devel-1.7.1-10.fc31.noarch.rpm Linear algebra and solver library using CUDA, OpenCL, and OpenMP
viennacl-doc-1.7.1-10.fc31.noarch.rpm Documentation for viennacl
viewmtn-0.10-25.20100308mtn0030ad67.fc31.noarch.rpm Web interface for Monotone version control system
viewnior-1.7-6.fc31.x86_64.rpm Elegant image viewer
vifm-0.8.2-9.fc31.x86_64.rpm Lightweight file manager with vi like key-bindings
vigra-1.11.1-16.fc31.i686.rpm Generic Programming for Computer Vision
vigra-1.11.1-16.fc31.x86_64.rpm Generic Programming for Computer Vision
vigra-devel-1.11.1-16.fc31.i686.rpm Development tools for programs which will use the vigra library
vigra-devel-1.11.1-16.fc31.x86_64.rpm Development tools for programs which will use the vigra library
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