R-BSgenome-1.32.0-1.fc21.noarch.rpm


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Description

R-BSgenome - Infrastructure for Biostrings-based genome data packages

Distribution: Fedora Rawhide
Repository: Fedora x86_64
Package name: R-BSgenome
Package version: 1.32.0
Package release: 1.fc21
Package architecture: noarch
Package type: rpm
Installed size: 1.14 MB
Download size: 790.54 KB
Official Mirror: dl.fedoraproject.org
Infrastructure shared by all the Biostrings-based genome data packages

Alternatives

Provides

  • R-BSgenome = 1.32.0-1.fc21

    Install Howto

    Install the R-BSgenome rpm package:

    # dnf install R-BSgenome

    Files

    • /usr/share/R/library/BSgenome/DESCRIPTION
    • /usr/share/R/library/BSgenome/INDEX
    • /usr/share/R/library/BSgenome/NAMESPACE
    • /usr/share/R/library/BSgenome/NEWS
    • /usr/share/R/library/BSgenome/Meta/Rd.rds
    • /usr/share/R/library/BSgenome/Meta/hsearch.rds
    • /usr/share/R/library/BSgenome/Meta/links.rds
    • /usr/share/R/library/BSgenome/Meta/nsInfo.rds
    • /usr/share/R/library/BSgenome/Meta/package.rds
    • /usr/share/R/library/BSgenome/Meta/vignette.rds
    • /usr/share/R/library/BSgenome/R/BSgenome
    • /usr/share/R/library/BSgenome/R/BSgenome.rdb
    • /usr/share/R/library/BSgenome/R/BSgenome.rdx
    • /usr/share/R/library/BSgenome/doc/BSgenomeForge.R
    • /usr/share/R/library/BSgenome/doc/BSgenomeForge.Rnw
    • /usr/share/R/library/BSgenome/doc/BSgenomeForge.pdf
    • /usr/share/R/library/BSgenome/doc/GenomeSearching.R
    • /usr/share/R/library/BSgenome/doc/GenomeSearching.Rnw
    • /usr/share/R/library/BSgenome/doc/GenomeSearching.pdf
    • /usr/share/R/library/BSgenome/doc/index.html
    • /usr/share/R/library/BSgenome/extdata/ce2chrM.fa
    • /usr/share/R/library/BSgenome/extdata/ce2dict0.fa
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.BeeBase.assembly4-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.UCSC.apiMel2-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.UCSC.apiMel2.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Athaliana.TAIR.01222004-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Athaliana.TAIR.04232008-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Athaliana.TAIR.TAIR9-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau3-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau3.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau4-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau4.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau6-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau6.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Celegans.UCSC.ce10-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Celegans.UCSC.ce2-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Celegans.UCSC.ce6-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Cfamiliaris.UCSC.canFam2-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Cfamiliaris.UCSC.canFam2.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Cfamiliaris.UCSC.canFam3-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Cfamiliaris.UCSC.canFam3.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Dmelanogaster.UCSC.dm2-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Dmelanogaster.UCSC.dm2.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Dmelanogaster.UCSC.dm3-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Dmelanogaster.UCSC.dm3.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer5-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer5.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer6-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer6.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer7-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer7.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Ecoli.NCBI.20080805-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Gaculeatus.UCSC.gasAcu1-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Gaculeatus.UCSC.gasAcu1.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Ggallus.UCSC.galGal3-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Ggallus.UCSC.galGal3.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Ggallus.UCSC.galGal4-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Ggallus.UCSC.galGal4.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.NCBI.GRCh38-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg17-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg17.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg18-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg18.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg19-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.UCSC.hg19.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Mmulatta.UCSC.rheMac2-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Mmulatta.UCSC.rheMac2.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Mmulatta.UCSC.rheMac3-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Mmulatta.UCSC.rheMac3.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Mmusculus.UCSC.mm10-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Mmusculus.UCSC.mm10.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Mmusculus.UCSC.mm8-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Mmusculus.UCSC.mm8.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Mmusculus.UCSC.mm9-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Mmusculus.UCSC.mm9.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Ptroglodytes.UCSC.panTro2-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Ptroglodytes.UCSC.panTro2.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Ptroglodytes.UCSC.panTro3-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Ptroglodytes.UCSC.panTro3.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Rnorvegicus.UCSC.rn4-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Rnorvegicus.UCSC.rn4.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Rnorvegicus.UCSC.rn5-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Rnorvegicus.UCSC.rn5.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Scerevisiae.UCSC.sacCer1-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Scerevisiae.UCSC.sacCer2-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Scerevisiae.UCSC.sacCer3-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Sscrofa.UCSC.susScr3-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Sscrofa.UCSC.susScr3.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Tguttata.UCSC.taeGut1-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Tguttata.UCSC.taeGut1.masked-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.influenza.NCBI.20100628-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/ForgeAll.R
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/bump_seed_version.sh
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/1000genomes/BSgenome.Hsapiens.1000g.b36female-seed
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/1000genomes/BSgenome.Hsapiens.1000g.b36female-tools/split_human_b36_female.sh
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.BeeBase.assembly4-tools/NOTES.TXT
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Amellifera.BeeBase.assembly4-tools/splitbigfasta.sh
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Athaliana.TAIR.TAIR9-tools/NOTES.TXT
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Btaurus.UCSC.bosTau6-tools/splitbigfasta.R
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Cfamiliaris.UCSC.canFam3-tools/splitbigfasta.R
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer5-tools/NOTES.TXT
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer5-tools/splitbigfasta.sh
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer6-tools/NOTES.TXT
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer6-tools/splitbigfasta.R
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer7-tools/NOTES.TXT
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Drerio.UCSC.danRer7-tools/splitbigfasta.R
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Ggallus.UCSC.galGal4-tools/splitbigfasta.R
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Hsapiens.NCBI.GRCh38-tools/splitbigfasta.R
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Mmulatta.UCSC.rheMac3-tools/splitbigfasta.R
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Ptroglodytes.UCSC.panTro3-tools/splitbigfasta.R
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Rnorvegicus.UCSC.rn5-tools/splitbigfasta.R
    • /usr/share/R/library/BSgenome/extdata/GentlemanLab/BSgenome.Sscrofa.UCSC.susScr3-tools/splitbigfasta.R
    • /usr/share/R/library/BSgenome/help/AnIndex
    • /usr/share/R/library/BSgenome/help/BSgenome.rdb
    • /usr/share/R/library/BSgenome/help/BSgenome.rdx
    • /usr/share/R/library/BSgenome/help/aliases.rds
    • /usr/share/R/library/BSgenome/help/paths.rds
    • /usr/share/R/library/BSgenome/html/00Index.html
    • /usr/share/R/library/BSgenome/html/BSParams-class.html
    • /usr/share/R/library/BSgenome/html/BSgenome-class.html
    • /usr/share/R/library/BSgenome/html/BSgenome-utils.html
    • /usr/share/R/library/BSgenome/html/BSgenomeForge.html
    • /usr/share/R/library/BSgenome/html/GenomeData-class.html
    • /usr/share/R/library/BSgenome/html/GenomeDataList-class.html
    • /usr/share/R/library/BSgenome/html/GenomeDescription-class.html
    • /usr/share/R/library/BSgenome/html/R.css
    • /usr/share/R/library/BSgenome/html/available.genomes.html
    • /usr/share/R/library/BSgenome/html/bsapply.html
    • /usr/share/R/library/BSgenome/html/gdReduce.html
    • /usr/share/R/library/BSgenome/html/gdapply.html
    • /usr/share/R/library/BSgenome/html/getSeq-methods.html
    • /usr/share/R/library/BSgenome/html/injectSNPs.html
    • /usr/share/R/library/BSgenome/pkgtemplates/
    • /usr/share/R/library/BSgenome/pkgtemplates/BSgenome_datapkg/DESCRIPTION
    • /usr/share/R/library/BSgenome/pkgtemplates/BSgenome_datapkg/NAMESPACE
    • /usr/share/R/library/BSgenome/pkgtemplates/BSgenome_datapkg/R/zzz.R
    • /usr/share/R/library/BSgenome/pkgtemplates/BSgenome_datapkg/inst/
    • /usr/share/R/library/BSgenome/pkgtemplates/BSgenome_datapkg/inst/extdata/
    • /usr/share/R/library/BSgenome/pkgtemplates/BSgenome_datapkg/man/package.Rd
    • /usr/share/R/library/BSgenome/pkgtemplates/MaskedBSgenome_datapkg/DESCRIPTION
    • /usr/share/R/library/BSgenome/pkgtemplates/MaskedBSgenome_datapkg/NAMESPACE
    • /usr/share/R/library/BSgenome/pkgtemplates/MaskedBSgenome_datapkg/R/zzz.R
    • /usr/share/R/library/BSgenome/pkgtemplates/MaskedBSgenome_datapkg/inst/
    • /usr/share/R/library/BSgenome/pkgtemplates/MaskedBSgenome_datapkg/inst/extdata/
    • /usr/share/R/library/BSgenome/pkgtemplates/MaskedBSgenome_datapkg/man/package.Rd

    Changelog

    2014-07-02 - pingou <pingou@pingoured.fr> 1.32.0-1 - Update to version 1.32.0 - Add R-Rsamtools and R-bitops as R and BR

    2014-06-06 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.30.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild

    2014-01-27 - pingou <pingou@pingoured.fr> 1.30.0-1 - Update to version 1.30.0

    2013-08-02 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.28.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_20_Mass_Rebuild

    2013-04-07 - pingou <pingou@pingoured.fr> 1.28.0-1 - Update to version 1.28.0

    2013-02-13 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.26.1-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_19_Mass_Rebuild

    2012-11-27 - pingou <pingou@pingoured.fr> 1.26.1-1 - Update to version 1.26.1

    2012-07-18 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.22.0-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_18_Mass_Rebuild

    2012-01-12 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 1.22.0-2 - Rebuilt for https://fedoraproject.org/wiki/Fedora_17_Mass_Rebuild

    2011-11-09 - Tom Callaway <spot@fedoraproject.org> 1.22.0-1 - update to 1.22.0

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