Ray-extra-2.3.1-12.fc24.x86_64.rpm


Advertisement

Description

Ray-extra - Scripts and XSL sheets for post-processing

Property Value
Distribution Fedora Rawhide
Repository Fedora x86_64
Package name Ray-extra
Package version 2.3.1
Package release 12.fc24
Package architecture x86_64
Package type rpm
Installed size 39.92 KB
Download size 24.06 KB
Official Mirror dl.fedoraproject.org
Ray is a parallel software that computes de novo genome assemblies with
next-generation sequencing data.
Ray is written in C++ and can run in parallel on numerous interconnected
computers using the message-passing interface (MPI) standard.
This sub-package contains scripts and XSL sheets for post-processing.

Alternatives

Package Version Architecture Repository
Ray-extra - - -

Requires

Name Value
/bin/bash -
/usr/bin/Rscript -
/usr/bin/env -
/usr/bin/python -
R -
Ray-common -
python -

Provides

Name Value
Ray-extra = 2.3.1-12.fc24
Ray-extra(x86-64) = 2.3.1-12.fc24

Download

Type URL
Binary Package Ray-extra-2.3.1-12.fc24.x86_64.rpm
Source Package Ray-2.3.1-12.fc24.src.rpm

Install Howto

Install the Ray-extra rpm package:

# dnf install Ray-extra

Files

Path
/usr/share/Ray/
/usr/share/Ray/scripts/Build-Link-Time-Optimization.sh
/usr/share/Ray/scripts/GenerateRayCommand.sh
/usr/share/Ray/scripts/ShipProduct.sh
/usr/share/Ray/scripts/dump-ChangeLog.sh
/usr/share/Ray/scripts/getSeq.py
/usr/share/Ray/scripts/illumina-split-linked-sequences-fastq.py
/usr/share/Ray/scripts/interleave-fasta.py
/usr/share/Ray/scripts/interleave-fastq.py
/usr/share/Ray/scripts/plot-color-distributions.R
/usr/share/Ray/scripts/plot-coverage-distribution.R
/usr/share/Ray/scripts/plot-library-distribution.R
/usr/share/Ray/scripts/NCBI-Taxonomy/Create-Taxon-Names.py
/usr/share/Ray/scripts/NCBI-Taxonomy/CreateRayInputStructures.sh
/usr/share/Ray/scripts/NCBI-Taxonomy/GenerateTaxonNames.py
/usr/share/Ray/scripts/NCBI-Taxonomy/README
/usr/share/Ray/scripts/NCBI-Taxonomy/generateTrees.sh
/usr/share/Ray/scripts/NCBI-Taxonomy/getName.py
/usr/share/Ray/scripts/NCBI-Taxonomy/getNameInFile.py
/usr/share/Ray/scripts/xsl-xml/SequenceAbundances-assembled.xsl
/usr/share/Ray/scripts/xsl-xml/SequenceAbundances-to-html-tables.xsl
/usr/share/Ray/scripts/xsl-xml/SequenceAbundances-to-html.xsl
/usr/share/Ray/scripts/xsl-xml/SequenceAbundances-to-tsv.xsl
/usr/share/Ray/scripts/xsl-xml/Taxons-to-html-tables.xsl
/usr/share/Ray/scripts/xsl-xml/Taxons-to-html.xsl
/usr/share/Ray/scripts/xsl-xml/Taxons-to-tsv-any-rank.xsl
/usr/share/Ray/scripts/xsl-xml/Taxons-to-tsv-class.xsl
/usr/share/Ray/scripts/xsl-xml/Taxons-to-tsv-family.xsl
/usr/share/Ray/scripts/xsl-xml/Taxons-to-tsv-genus.xsl
/usr/share/Ray/scripts/xsl-xml/Taxons-to-tsv-order.xsl
/usr/share/Ray/scripts/xsl-xml/Taxons-to-tsv-phylum.xsl
/usr/share/Ray/scripts/xsl-xml/Taxons-to-tsv-species.xsl
/usr/share/Ray/scripts/xsl-xml/Terms-to-tsv.xsl

Changelog

2015-09-15 - Orion Poplawski <orion@cora.nwra.com> - 2.3.1-12
- Rebuild for openmpi 1.10.0
2015-08-15 - Zbigniew Jędrzejewski-Szmek <zbyszek@in.waw.pl> - 2.3.1-11
- Rebuild for MPI provides
2015-07-26 - Sandro Mani <manisandro@gmail.com> - 2.3.1-10
- Rebuild for RPM MPI Requires Provides Change
2015-06-16 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.3.1-9
- Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild
2015-05-02 - Kalev Lember <kalevlember@gmail.com> - 2.3.1-8
- Rebuilt for GCC 5 C++11 ABI change
2015-03-16 - Sebastien Boisvert <boisvert@anl.gov> - 2.3.1-7
- fix linking issue in rawhide
2014-11-05 - Tuomo Soini <tis@foobar.fi> - 2.3.1-6
- Ray-mpich2 got obsoleted by rhel 6.6 update
2014-08-15 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.3.1-5
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild
2014-06-06 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.3.1-4
- Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild
2014-03-02 - Sébastien Boisvert <sebastien.boisvert.3@ulaval.ca> - 2.3.1-3
- use correct macro name to load/unload mpich2

See Also

Package Description
Ray-mpich-2.3.1-12.fc24.x86_64.rpm Ray package for MPICH
Ray-openmpi-2.3.1-12.fc24.x86_64.rpm Ray package for Open-MPI
RdRand-2.1.1-5.fc28.i686.rpm Library for generating random numbers using the RdRand instruction on Intel CPUs
RdRand-2.1.1-5.fc28.x86_64.rpm Library for generating random numbers using the RdRand instruction on Intel CPUs
RdRand-devel-2.1.1-5.fc28.i686.rpm Development files for the RdRand
RdRand-devel-2.1.1-5.fc28.x86_64.rpm Development files for the RdRand
RemoteBox-2.4-2.fc28.noarch.rpm Open Source VirtualBox Client with Remote Management
RepetierHost-0.90D-10.fc28.noarch.rpm 3D printer control software
Rex-1.5.0-3.fc28.noarch.rpm Tool for Automation, Remote Execution and Configuration Deployment
Ri-li-2.0.1-23.fc28.x86_64.rpm Arcade game where you drive a toy wood engine
RunSnakeRun-2.0.4-9.fc28.noarch.rpm GUI Viewer for Python profiling runs
RxCpp-devel-4.0.0-2.fc29.noarch.rpm Reactive Extensions for C++
RxCpp-doc-4.0.0-2.fc29.noarch.rpm API-documentation for RxCpp
SAASound-3.2-20.fc28.i686.rpm Phillips SAA 1099 sound chip emulator library
SAASound-3.2-20.fc28.x86_64.rpm Phillips SAA 1099 sound chip emulator library
Advertisement
Advertisement