bionetgen-2.5.0-5.fc32.x86_64.rpm


Advertisement

Description

bionetgen - Software for rule-based modeling of biochemical systems

Property Value
Distribution Fedora Rawhide
Repository Fedora x86_64
Package filename bionetgen-2.5.0-5.fc32.x86_64.rpm
Package name bionetgen
Package version 2.5.0
Package release 5.fc32
Package architecture x86_64
Package type rpm
Homepage https://github.com/RuleWorld/bionetgen
License GPLv3
Maintainer -
Download size 254.61 KB
Installed size 725.19 KB
BioNetGen is software for the specification and simulation of
rule-based models of biochemical systems, including signal
transduction, metabolic, and genetic regulatory networks. The
BioNetGen language has recently been extended to include explicit
representation of compartments. A review of methods for rule-based
modeling is available in Science Signaling (Sci. STKE, 18 July 2006,
Issue 344, p. re6).
BioNetGen is presently a mixture of Perl and C++. Network generation
is currently implemented in Perl, the network simulator is C++, and a
new language parser is being developed with ANTLR.

Alternatives

Package Version Architecture Repository
bionetgen - - -

Requires

Name Value
bionetgen-perl = 2.5.0-5.fc32
libc.so.6(GLIBC_2.14)(64bit) -
libgcc_s.so.1()(64bit) -
libgcc_s.so.1(GCC_3.0)(64bit) -
libm.so.6()(64bit) -
libm.so.6(GLIBC_2.2.5)(64bit) -
libm.so.6(GLIBC_2.29)(64bit) -
libmuparser.so.2()(64bit) -
libstdc++.so.6()(64bit) -
libstdc++.so.6(CXXABI_1.3)(64bit) -
libstdc++.so.6(CXXABI_1.3.8)(64bit) -
libstdc++.so.6(CXXABI_1.3.9)(64bit) -
libstdc++.so.6(GLIBCXX_3.4)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.11)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.20)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.21)(64bit) -
libstdc++.so.6(GLIBCXX_3.4.9)(64bit) -
rtld(GNU_HASH) -

Provides

Name Value
bionetgen = 2.5.0-5.fc32
bionetgen(x86-64) = 2.5.0-5.fc32

Download

Type URL
Mirror download-ib01.fedoraproject.org
Binary Package bionetgen-2.5.0-5.fc32.x86_64.rpm
Source Package bionetgen-2.5.0-5.fc32.src.rpm

Install Howto

Install bionetgen rpm package:

# dnf install bionetgen

Files

Path
/usr/bin/run_network
/usr/lib/.build-id/
/usr/lib/.build-id/26/8ed6c5c663c5038998f247410586c25972f89f
/usr/share/doc/bionetgen/CHANGES.txt
/usr/share/doc/bionetgen/CREDITS.txt
/usr/share/doc/bionetgen/README.md
/usr/share/doc/bionetgen/VERSION
/usr/share/licenses/bionetgen/LICENSE

Changelog

2019-07-24 - Fedora Release Engineering <releng@fedoraproject.org> - 2.5.0-5
- Rebuilt for https://fedoraproject.org/wiki/Fedora_31_Mass_Rebuild
2019-07-01 - Antonio Trande <sagitterATfedoraproject.org> - 2.5.0-4
- Use devtoolset-8 on EPEL 7
2019-07-01 - Antonio Trande <sagitterATfedoraproject.org> - 2.5.0-3
- Rebuild for sundials
2019-05-30 - Jitka Plesnikova <jplesnik@redhat.com> - 2.5.0-2
- Perl 5.30 rebuild
2019-05-07 - Antonio Trande <sagitterATfedoraproject.org> - 2.5.0-1
- Release 2.5.0
2019-04-20 - Antonio Trande <sagitterATfedoraproject.org> - 2.4.0-5
- Ready for MPI (disabled)
- Bundle Sundials
2019-02-13 - Orion Poplawski <orion@cora.nwra.com> - 2.4.0-4
- Rebuild for openmpi 3.1.3
2019-01-31 - Fedora Release Engineering <releng@fedoraproject.org> - 2.4.0-3
- Rebuilt for https://fedoraproject.org/wiki/Fedora_30_Mass_Rebuild
2018-11-09 - Antonio Trande <sagitterATfedoraproject.org> - 2.4.0-2
- Filtering of SBMLMultiAux module
2018-11-08 - Antonio Trande <sagitterATfedoraproject.org> - 2.4.0-1
- Release 2.4.0
- Drop obsolete patch
- Rebuild on epel7 (rhbz#1647989)

See Also

Package Description
bionetgen-perl-2.5.0-5.fc32.noarch.rpm Perl scripts and Models used by bionetgen
bios_extract-0-0.24.20180628giteffb120.fc31.x86_64.rpm Tools to extract the different submodules of common legacy bioses
biosdevname-0.7.3-4.fc31.x86_64.rpm Udev helper for naming devices per BIOS names
biosig4c++-1.9.5-1.gita2aae2b.fc32.i686.rpm A software library for processing of biomedical signals
biosig4c++-1.9.5-1.gita2aae2b.fc32.x86_64.rpm A software library for processing of biomedical signals
biosig4c++-devel-1.9.5-1.gita2aae2b.fc32.i686.rpm A software library for processing of biomedical signals
biosig4c++-devel-1.9.5-1.gita2aae2b.fc32.x86_64.rpm A software library for processing of biomedical signals
bip-0.9.0-0.4.20181225gitc9cc64f.fc31.x86_64.rpm IRC Bouncer
bird-2.0.6-1.fc32.x86_64.rpm BIRD Internet Routing Daemon
bird-doc-2.0.6-1.fc32.noarch.rpm Documentation for BIRD Internet Routing Daemon
bison-3.4.1-2.fc31.x86_64.rpm A GNU general-purpose parser generator
bison-devel-3.4.1-2.fc31.i686.rpm -ly library for development using Bison-generated parsers
bison-devel-3.4.1-2.fc31.x86_64.rpm -ly library for development using Bison-generated parsers
bison-runtime-3.4.1-2.fc31.x86_64.rpm Runtime support files used by Bison-generated parsers
bitlbee-3.5.2-0.3.20180919git0b1448f.fc31.i686.rpm IRC to other chat networks gateway
Advertisement
Advertisement