ncbi-blast+-2.2.31-4.fc24.x86_64.rpm


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Description

ncbi-blast+ - NCBI BLAST+ finds regions of similarity between biological sequences

Distribution: Fedora Rawhide
Repository: Fedora x86_64
Package name: ncbi-blast+
Package version: 2.2.31
Package release: 4.fc24
Package architecture: x86_64
Package type: rpm
Installed size: 39.36 MB
Download size: 10.29 MB
Official Mirror: dl.fedoraproject.org
The NCBI Basic Local Alignment Search Tool (BLAST) finds regions of local similarity between sequences. The program compares nucleotide or protein sequences to sequence databases and calculates the statistical significance of matches. BLAST can be used to infer functional and evolutionary relationships between sequences as well as help identify members of gene families.

Alternatives

Provides

  • ncbi-blast+ = 2.2.31-4.fc24
  • ncbi-blast+(x86-64) = 2.2.31-4.fc24

    Install Howto

    Install the ncbi-blast+ rpm package:

    # dnf install ncbi-blast+

    Files

    • /usr/bin/blast_formatter
    • /usr/bin/blastdb_aliastool
    • /usr/bin/blastdbcheck
    • /usr/bin/blastdbcmd
    • /usr/bin/blastn
    • /usr/bin/blastp
    • /usr/bin/blastx
    • /usr/bin/convert2blastmask
    • /usr/bin/deltablast
    • /usr/bin/dustmasker
    • /usr/bin/legacy_blast.pl
    • /usr/bin/makeblastdb
    • /usr/bin/makembindex
    • /usr/bin/makeprofiledb
    • /usr/bin/psiblast
    • /usr/bin/rpsblast
    • /usr/bin/rpstblastn
    • /usr/bin/segmasker
    • /usr/bin/tblastn
    • /usr/bin/tblastx
    • /usr/bin/update_blastdb.pl
    • /usr/bin/windowmasker
    • /usr/lib64/ncbi-blast+/libalign_format.so
    • /usr/lib64/ncbi-blast+/libbiblio.so
    • /usr/lib64/ncbi-blast+/libblast.so
    • /usr/lib64/ncbi-blast+/libblast_services.so
    • /usr/lib64/ncbi-blast+/libblastdb.so
    • /usr/lib64/ncbi-blast+/libblastdb_format.so
    • /usr/lib64/ncbi-blast+/libblastinput.so
    • /usr/lib64/ncbi-blast+/libblastxml.so
    • /usr/lib64/ncbi-blast+/libblastxml2.so
    • /usr/lib64/ncbi-blast+/libcomposition_adjustment.so
    • /usr/lib64/ncbi-blast+/libconnect.so
    • /usr/lib64/ncbi-blast+/libcreaders.so
    • /usr/lib64/ncbi-blast+/libentrez2.so
    • /usr/lib64/ncbi-blast+/libentrez2cli.so
    • /usr/lib64/ncbi-blast+/libgbseq.so
    • /usr/lib64/ncbi-blast+/libgene_info.so
    • /usr/lib64/ncbi-blast+/libgeneral.so
    • /usr/lib64/ncbi-blast+/libgenome_collection.so
    • /usr/lib64/ncbi-blast+/libid1.so
    • /usr/lib64/ncbi-blast+/libid2.so
    • /usr/lib64/ncbi-blast+/libid2_split.so
    • /usr/lib64/ncbi-blast+/libigblast.so
    • /usr/lib64/ncbi-blast+/libmedlars.so
    • /usr/lib64/ncbi-blast+/libmedline.so
    • /usr/lib64/ncbi-blast+/libmla.so
    • /usr/lib64/ncbi-blast+/libmlacli.so
    • /usr/lib64/ncbi-blast+/libncbi_xloader_blastdb.so
    • /usr/lib64/ncbi-blast+/libncbi_xloader_blastdb_rmt.so
    • /usr/lib64/ncbi-blast+/libncbi_xloader_genbank.so
    • /usr/lib64/ncbi-blast+/libncbi_xreader.so
    • /usr/lib64/ncbi-blast+/libncbi_xreader_cache.so
    • /usr/lib64/ncbi-blast+/libncbi_xreader_id1.so
    • /usr/lib64/ncbi-blast+/libncbi_xreader_id2.so
    • /usr/lib64/ncbi-blast+/libpub.so
    • /usr/lib64/ncbi-blast+/libpubmed.so
    • /usr/lib64/ncbi-blast+/libscoremat.so
    • /usr/lib64/ncbi-blast+/libseq.so
    • /usr/lib64/ncbi-blast+/libseqcode.so
    • /usr/lib64/ncbi-blast+/libseqdb.so
    • /usr/lib64/ncbi-blast+/libseqedit.so
    • /usr/lib64/ncbi-blast+/libseqmasks_io.so
    • /usr/lib64/ncbi-blast+/libseqset.so
    • /usr/lib64/ncbi-blast+/libseqsplit.so
    • /usr/lib64/ncbi-blast+/libsequtil.so
    • /usr/lib64/ncbi-blast+/libsubmit.so
    • /usr/lib64/ncbi-blast+/libtables.so
    • /usr/lib64/ncbi-blast+/libtaxon1.so
    • /usr/lib64/ncbi-blast+/libtest_boost.so
    • /usr/lib64/ncbi-blast+/libtest_mt.so
    • /usr/lib64/ncbi-blast+/libvalerr.so
    • /usr/lib64/ncbi-blast+/libvalid.so
    • /usr/lib64/ncbi-blast+/libvariation.so
    • /usr/lib64/ncbi-blast+/libwritedb.so
    • /usr/lib64/ncbi-blast+/libxalgoblastdbindex.so
    • /usr/lib64/ncbi-blast+/libxalgodustmask.so
    • /usr/lib64/ncbi-blast+/libxalgosegmask.so
    • /usr/lib64/ncbi-blast+/libxalgowinmask.so
    • /usr/lib64/ncbi-blast+/libxalnmgr.so
    • /usr/lib64/ncbi-blast+/libxblast.so
    • /usr/lib64/ncbi-blast+/libxblastformat.so
    • /usr/lib64/ncbi-blast+/libxcgi.so
    • /usr/lib64/ncbi-blast+/libxcleanup.so
    • /usr/lib64/ncbi-blast+/libxcompress.so
    • /usr/lib64/ncbi-blast+/libxconnect.so
    • /usr/lib64/ncbi-blast+/libxformat.so
    • /usr/lib64/ncbi-blast+/libxhtml.so
    • /usr/lib64/ncbi-blast+/libxncbi.so
    • /usr/lib64/ncbi-blast+/libxnetblast.so
    • /usr/lib64/ncbi-blast+/libxnetblastcli.so
    • /usr/lib64/ncbi-blast+/libxobjmgr.so
    • /usr/lib64/ncbi-blast+/libxobjread.so
    • /usr/lib64/ncbi-blast+/libxobjsimple.so
    • /usr/lib64/ncbi-blast+/libxobjutil.so
    • /usr/lib64/ncbi-blast+/libxregexp.so
    • /usr/lib64/ncbi-blast+/libxser.so
    • /usr/lib64/ncbi-blast+/libxutil.so
    • /usr/share/doc/ncbi-blast+/ChangeLog
    • /usr/share/doc/ncbi-blast+/LICENSE
    • /usr/share/doc/ncbi-blast+/README

    Changelog

    2015-08-25 - Jan Kaluza <jkaluza@redhat.com> - 2.2.31-4 - fix broken requires

    2015-07-29 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.2.31-3 - Rebuilt for https://fedoraproject.org/wiki/Changes/F23Boost159

    2015-07-22 - David Tardon <dtardon@redhat.com> - 2.2.31-2 - rebuild for Boost 1.58

    2015-07-20 - Jan Kaluza <jkaluza@redhat.com> - 2.2.31-1 - update to new upstream version 2.2.31

    2015-06-18 - Ralf Cors├ępius <corsepiu@fedoraproject.org> - 2.2.30-4 - Add gcc-5.x support (ncbi-blast+-2.2.30-gcc5.patch, Fix FTBFS).

    2015-06-17 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.2.30-3 - Rebuilt for https://fedoraproject.org/wiki/Fedora_23_Mass_Rebuild

    2015-01-27 - Petr Machata <pmachata@redhat.com> - 2.2.30-2 - Rebuild for boost 1.57.0

    2014-11-05 - Jan Kaluza <jkaluza@redhat.com> - 2.2.30-1 - update to new upstream versino 2.2.30

    2014-08-17 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.2.29-5 - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_22_Mass_Rebuild

    2014-06-07 - Fedora Release Engineering <rel-eng@lists.fedoraproject.org> - 2.2.29-4 - Rebuilt for https://fedoraproject.org/wiki/Fedora_21_Mass_Rebuild

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